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ZIRC
ZFIN ID: ZDB-GENE-030131-6410
Gene Name: translocated promoter region b, nuclear basket protein
Gene Symbol: tprb
Sequence Ontology ID : SO:0001217

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Previous Names: tpr, si:dkey-97o5.5, wu:fi76g05

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of nuclear pore. Predicted to be involved in mitotic spindle assembly checkpoint. Predicted to localize to the nuclear pore. Is expressed in liver.  ...
GENE EXPRESSION
All Expression Data: 2 figures from Cheng et al., 2006
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14064 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa18388 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23752 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23753 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23754 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa29399 Point Mutation Unknown Premature Stop ENU
    sa32305 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37088 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37089 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37090 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa39290 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa43486 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45709 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tprb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH tprb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein import into nucleus (more)
    Cellular Component nuclear pore (more)
    Molecular Function structural constituent of nuclear pore (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR012929 (1)
  • Pfam:PF07926 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA tprb-002 (1) 731
    mRNA tprb-201 (1) 7285
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tprb No data available
    MARKER RELATIONSHIPS
    tprb Contained in: [BAC] DKEY-97O5 (1) (order this)
    tprb Encodes: [EST] fi76g05
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030123 (1) 7267 bp
    Genomic GenBank:BX323056 (1) 134072 bp
    Select Tool
    Polypeptide UniProtKB:Q5RI09 (1) 2352 aa
    Sequence Clusters UniGene:52426 (1)
    Sequence Information (all 16)
    ORTHOLOGY for tprb ( Chr: 20 )
    CITATIONS (19)