ZFIN ID: ZDB-GENE-030131-5409
Gene Name: mical-like 2a
Gene Symbol: micall2a
Sequence Ontology ID : SO:0000704

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Previous Names: micall2, fd16d06, wu:fd16d06, wu:fd16d07, zgc:55358 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Rab GTPase binding activity and metal ion binding activity; predicted to be involved in endocytic recycling; orthologous to human MICALL2 (MICAL like 2).
GENE EXPRESSION
All Expression Data: 13 figures from 2 publications
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2004 [MGC:55358]
  6 figures (17 images) from Thisse et al., 2004 [IMAGE:7153293]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20111 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33290 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH micall2a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH micall2a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process endocytic recycling (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001715 (1)
  • InterPro:IPR001781 (1)
  • InterPro:IPR022735 (1)
  • InterPro:IPR028563 (1)
  • InterPro:IPR036872 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50021 (1)
  • PROSITE:PS50023 (1)
  • PROSITE:PS51848 (1)
  • Pfam:PF00307 (1)
  • Pfam:PF00412 (1)
  • Pfam:PF12130 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA micall2a-201 (1) 3588
    aberrant processed transcript micall2a-202 (1) 3661
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM micall2a No data available
    MARKER RELATIONSHIPS
    micall2aContained in: [BAC] DKEY-43P13 (1) (order this)
    micall2aContains: [SNP] rs3727726 (1)
    micall2aEncodes: [EST] fd16d06, fd16d07, IMAGE:7153293 (1) (order this)
    [cDNA] MGC:55358 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001327787 (1)
    Genomic GenBank:BX908797 (1) 222385bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A0R4INF7 (1) 799aa
    Sequence Clusters UniGene:78553 (1)
    Sequence Information (all 30)
    OTHER micall2a GENE PAGES
  • Alliance (1)
  • Gene:327198 (1)
  • VEGA:OTTDARG00000021862 (1)
  • Ensembl(GRCz11):ENSDARG00000102366 (1)
  • ORTHOLOGY for micall2a (Chr: 3)
    CITATIONS (19)