ZFIN ID: ZDB-GENE-030131-5297
Gene Name: ribosomal protein L12
Gene Symbol: rpl12    Nomenclature History

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Previous Names: wu:fa27c04, wu:fa91d03, wu:fb14g09, wu:fj26g11, zgc:103615

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have large ribosomal subunit rRNA binding activity. Predicted to be involved in ribosomal large subunit assembly and translation. Predicted to localize to cytosolic large ribosomal subunit. Is expressed in endodermal cell; eye; intestine; liver; and pancreas. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL12 (ribosomal protein L12).
Genome Resources: Alliance (1),  Gene:327089 (1),  Ensembl(GRCz11):ENSDARG00000006691 (1)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56662]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi3076Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la024985Tg Transgenic Insertion Unknown Unknown DNA
    sa26510 Point Mutation Unknown Unknown ENU
    DISEASE ASSOCIATED WITH rpl12 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH rpl12 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component ribosome (more)
    Molecular Function structural constituent of ribosome (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA rpl12-201 (1)    Ensembl 787
    ncRNA rpl12-002 (1)    Ensembl 766
    rpl12-003 (1)    Ensembl 818
    rpl12-004 (1)    Ensembl 569
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rpl12 No data available
    MARKER RELATIONSHIPS
    rpl12 Contained in: [BAC] CH211-208H16 (1)
    rpl12 Encodes: [EST] fa27c04, fa91d03 (1), fb14g09 (1), fj26g11
    [cDNA] MGC:56662 (1), MGC:103615 (1), MGC:192501 (1)
    rpl12 Is Hybridized by: [EST] fj18a12
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_201584 (1) 980 nt
    Genomic GenBank:CR925757 (1) 154617 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q7N4 (1) 182 aa
    Sequence Information (all 26)
    ORTHOLOGY for rpl12 ( Chr: 5 )
    CITATIONS (42)