ZFIN ID: ZDB-GENE-030131-4631
Gene Name: tocopherol (alpha) transfer protein
Gene Symbol: ttpa
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: wu:fd44e05, zgc:66361

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have intermembrane lipid transfer activity and vitamin E binding activity; involved in central nervous system development and chordate embryonic development; predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66361]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE
Data: 2 figures from Miller et al., 2012
Observed in:
DISEASE ASSOCIATED WITH ttpa HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
familial isolated deficiency of vitamin E Ataxia with isolated vitamin E deficiency 277460
DISEASE ASSOCIATED WITH ttpa VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process central nervous system development (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001251 (1)
  • InterPro:IPR011074 (1)
  • InterPro:IPR036273 (1)
  • InterPro:IPR036865 (1)
  • PROSITE:PS50191 (1)
  • Pfam:PF00650 (1)
  • Pfam:PF03765 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ttpa-001 (1) 1837
    ncRNA ttpa-002 (1) 1841
    ttpa-003 (1) 1045
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ttpa No data available
    MARKER RELATIONSHIPS
    ttpaContained in: [BAC] DKEY-181M9 (1) (order this)
    ttpaEncodes: [EST] fd44e05
    [cDNA] MGC:66361 (1) (order this), MGC:192302 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199731 (1) 1858bp
    Genomic GenBank:BX248497 (1) 145610bp
    Select Tool
    Polypeptide UniProtKB:B0S5J5 (1) 285aa
    Sequence Clusters UniGene:78274 (1)
    Sequence Information (all 17)
    OTHER ttpa GENE PAGES
  • Alliance (1)
  • Gene:325906 (1)
  • VEGA:OTTDARG00000019744 (1)
  • Ensembl(GRCz11):ENSDARG00000027584 (2)
  • ORTHOLOGY for ttpa (Chr: 2)
    CITATIONS (16)