ZFIN ID: ZDB-GENE-030131-433
Gene Name: SET nuclear proto-oncogene b
Gene Symbol: setb
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fb30g11, wu:fd16c08

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Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 5 figures from 2 publications
Directly Submitted Expression Data: 4 figures (12 images) from Rauch et al., 2003 [fu06a08]
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12096 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 4 figures from Serifi et al., 2016
    Observed in:
    DISEASE ASSOCIATED WITH setb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Mental retardation, autosomal dominant 58 618106
    Mental retardation, autosomal dominant 58 618106
    DISEASE ASSOCIATED WITH setb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process neuromast development (more)
    Cellular Component nucleus (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002164 (1)
  • InterPro:IPR037231 (1)
  • Pfam:PF00956 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA setb-001 (1) 1862
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM setb No data available
    MARKER RELATIONSHIPS
    setbContained in: [BAC] DKEY-156G19 (1) (order this)
    setbEncodes: [EST] fb30g11, fd16c08 (1), fu06a08 (1) (order this)
    [cDNA] MGC:77152 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201468 (1) 1869bp
    Genomic GenBank:CU466275 (1) 104457bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8QJ70 (1) 287aa
    Sequence Clusters UniGene:119738 (1)
    Sequence Information (all 21)
    OTHER setb GENE PAGES
  • Alliance (1)
  • Gene:321714 (1)
  • VEGA:OTTDARG00000031457 (1)
  • Ensembl(GRCz11):ENSDARG00000003920 (2)
  • ORTHOLOGY for setb (Chr: 21)
    CITATIONS (19)