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ZIRC
ZFIN ID: ZDB-GENE-030131-3727
Gene Name: syndecan binding protein (syntenin) 2
Gene Symbol: sdcbp2
Sequence Ontology ID : SO:0000704

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Previous Names: sdcbp, syntenin-a (1), wu:fc51c03, wu:fk31e01, zgc:55679, zgc:77716

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits phosphatidylinositol-3,4-bisphosphate binding activity and syndecan binding activity; involved in several processes, including epiboly involved in gastrulation with mouth forming second,  ...
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55679]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la022487Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37651 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa37652 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH sdcbp2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sdcbp2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process response to hypoxia (more)
    Cellular Component cytoplasm (more)
    Molecular Function phosphatidylinositol-3,4-bisphosphate binding (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sdcbp2-201 (1) 2508
    sdcbp2-202 (1) 864
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sdcbp2 No data available
    MARKER RELATIONSHIPS
    sdcbp2Contained in: [BAC] CH211-224L10 (1) (order this)
    sdcbp2Encodes: [EST] fc51c03, fk31e01 (1)
    [cDNA] MGC:55679 (1) (order this), MGC:77716 (1) (order this), MGC:191239 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212691 (1) 1790bp
    Genomic GenBank:BX296551 (1) 180447bp
    Select Tool
    Polypeptide UniProtKB:Q803J6 (1) 299aa
    Sequence Clusters UniGene:1778 (1)
    Sequence Information (all 26)
    ORTHOLOGY for sdcbp2 (Chr: 23)
    CITATIONS (28)