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ZIRC
ZFIN ID: ZDB-GENE-030131-321
Gene Name: cyclin-dependent kinase 9 (CDC2-related kinase)
Gene Symbol: cdk9
Sequence Ontology ID : SO:0001217

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Previous Names: wu:fb22e09, wu:fc06c02

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have several functions, including cyclin binding activity; protein serine/threonine kinase activity; and transcription regulatory region DNA binding activity. Involved in cardiac muscle  ...
GENE EXPRESSION
All Expression Data: 5 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66392]
  1 figure (1 image) from Thisse et al., 2005 [eu149]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7163467]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ed9 Small Deletion Exon 2 Frameshift, Premature Stop CRISPR
sa14013 Point Mutation Unknown Unknown ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH cdk9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdk9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cardiac muscle tissue regeneration (more)
    Cellular Component chromosome (more)
    Molecular Function ATP binding (more)
    GO Terms (all 25)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cdk9-201 (1) 1782
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdk9 No data available
    MARKER RELATIONSHIPS
    cdk9 Contained in: [BAC] DKEY-93M18 (1) (order this)
    cdk9 Contains: [SNP] rs3729067 (1)
    cdk9 Encodes: [EST] eu149 (1), fb22e09, fc06c02, IMAGE:7163467 (1) (order this)
    [cDNA] MGC:66392 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212591 (1) 1768 bp
    Genomic GenBank:BX530036 (1) 211643 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q7T3L5 (1) 393 aa
    Sequence Clusters UniGene:26326 (1)
    Sequence Information (all 19)
    ORTHOLOGY for cdk9 ( Chr: 21 )
    CITATIONS (31)