Gene

optc

ID
ZDB-GENE-030131-1798
Name
opticin
Symbol
optc Nomenclature History
Previous Names
  • optcl (1)
  • dspg3
  • wu:fb81a05
  • zgc:101047
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Is expressed in several structures, including axis; floor plate; immature eye; paraxial mesoderm; and somite. Orthologous to human OPTC (opticin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
19 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With optc Human Ortholog
No data available
Associated With optc Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000372 Leucine-rich repeat N-terminal domain
Family IPR043547 Mimecan/Epiphycan
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat N-terminal domain Leucine-rich repeat, typical subtype Mimecan/Epiphycan
UniProtKB:A8BBE6 321
UniProtKB:Q15JE7 322
UniProtKB:Q6DC21 239
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations