ZFIN ID: ZDB-GENE-021115-6
Gene Name: LIM domain only 1
Gene Symbol: lmo1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: lmo1b, cb524 (1), etID41074.7 (1), wu:fb76g02 (1), zgc:109794

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity; predicted to localize to the nucleus; orthologous to human LMO1 (LIM domain only 1).
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 6 figures (15 images) from Thisse et al., 2001 [cb524]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH lmo1 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Leukemia, T-cell acute lymphoblastic
DISEASE ASSOCIATED WITH lmo1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function metal ion binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001781 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50023 (1)
  • Pfam:PF00412 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA lmo1-201 (1) 1761
    lmo1-202 (1) 809
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM lmo1
    MARKER RELATIONSHIPS
    lmo1Contained in: [BAC] CH73-226L19 (1) (order this), DKEY-61M24 (order this)
    lmo1Encodes: [EST] cb524 (1) (order this), fb76g02 (1)
    [cDNA] MGC:109794 (1) (order this), MGC:192080 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173219 (1) 1739bp
    Genomic GenBank:BX072554 (1) 190879bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4IIA9 (1) 175aa
    Sequence Clusters UniGene:77277 (1)
    Sequence Information (all 33)
    OTHER lmo1 GENE PAGES
  • Alliance (1)
  • Gene:280646 (1)
  • VEGA:OTTDARG00000004211 (1)
  • Ensembl(GRCz11):ENSDARG00000034504 (2)
  • ORTHOLOGY for lmo1 (Chr: 7)
    CITATIONS (30)