ZFIN ID: ZDB-GENE-020919-2
Gene Name: SEC31 homolog A, COPII coat complex component
Gene Symbol: sec31a
Sequence Ontology ID : SO:0000704

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Previous Names: sec31p, cb354 (1)

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have structural molecule activity; involved in digestive system development, endoplasmic reticulum organization, and liver development; predicted to localize to the COPII vesicle coat  ...
GENE EXPRESSION
All Expression Data: 11 figures from 3 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2001 [cb354]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la011909Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027204Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la027205Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa1082 Point Mutation Unknown Premature Stop ENU
    sa31763 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa34821 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41581 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 5 figures from Niu et al., 2012
    Observed in:
    DISEASE ASSOCIATED WITH sec31a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sec31a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process digestive system development (more)
    Cellular Component COPII vesicle coat (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR036322 (1)
  • InterPro:IPR040251 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50294 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sec31a-202 (1) 4414
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sec31a No data available
    MARKER RELATIONSHIPS
    sec31aContained in: [BAC] CH211-249H16 (1) (order this)
    sec31aEncodes: [EST] cb354 (1) (order this), wz12226 (1)
    [cDNA] MGC:63547 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_199530 (1) 4443bp
    Genomic GenBank:CR847788 (1) 176964bp
    Select Tool
    Polypeptide UniProtKB:Q7SYD5 (1) 1254aa
    Sequence Clusters UniGene:19511 (1)
    Sequence Information (all 31)
    OTHER sec31a GENE PAGES
  • Alliance (1)
  • Gene:266638 (1)
  • VEGA:OTTDARG00000019628 (1)
  • ORTHOLOGY for sec31a (Chr: 10)
    CITATIONS (24)