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ZIRC
ZFIN ID: ZDB-GENE-020531-2
Gene Name: aryl hydrocarbon receptor 1a
Gene Symbol: ahr1a
Sequence Ontology ID : SO:0000704

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Previous Names: ahr1, AHR2 (1), ahra, zfAHR1

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity; DNA-binding transcription factor activity; and protein dimerization activity. Involved in cellular response to organic cyclic compound. Predicted to localize  ...
GENE EXPRESSION
All Expression Data: 5 figures from 5 publications
Wild-type Stages, Structures: Hatching:Long-pec (48.0h-60.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
mu152 Small Deletion Exon 2 Unknown TALEN
mu153 Small Deletion Exon 2 Frameshift, Premature Stop TALEN
mu154 Small Deletion Exon 2 Unknown TALEN
sa1410 Point Mutation Unknown Premature Stop ENU
sa16655 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa28637 Point Mutation Unknown Premature Stop ENU
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ahr1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Retinitis pigmentosa 85 618345
    ?Retinitis pigmentosa 85 618345
    DISEASE ASSOCIATED WITH ahr1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cellular response to organic cyclic compound (more)
    Cellular Component cytoplasm (more)
    Molecular Function NOT ligand-activated transcription factor activity (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ahr1a-202 (1) 2759
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ahr1a No data available
    MARKER RELATIONSHIPS
    ahr1aContained in: [BAC] DKEY-242C17 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131028 (1) 2873bp
    Genomic GenBank:BX511151 (1) 157538bp
    Select Tool
    Polypeptide UniProtKB:Q8QGQ3 (1) 805aa
    Sequence Clusters UniGene:17547 (1)
    Sequence Information (all 14)
    ORTHOLOGY for ahr1a (Chr: 16)
    CITATIONS (58)