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ZIRC
ZFIN ID: ZDB-GENE-011010-2
Gene Name: GA binding protein transcription factor subunit alpha
Gene Symbol: gabpa
Sequence Ontology ID : SO:0001217

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Previous Names: e4tf, wu:fc12d11 (1)

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in cell differentiation and regulation of transcription by RNA polymerase II.  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:66115]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34692 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gabpa HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gabpa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA gabpa-004 (1) 771
    mRNA gabpa-201 (1) 1914
    gabpa-202 (1) 1931
    gabpa-204 (1) 1007
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gabpa No data available
    MARKER RELATIONSHIPS
    gabpa Contained in: [BAC] DKEY-192G7 (1) (order this)
    gabpa Contains: [SNP] rs3728229 (1), rs3728230 (1), rs3728231 (1)
    gabpa Encodes: [EST] fc12d11 (1)
    [cDNA] MGC:66115 (1) (order this), MGC:76829 (1) (order this), MGC:192428 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131587 (1) 1902 bp
    Genomic GenBank:CR759841 (1) 94752 bp
    Select Tool
    Polypeptide UniProtKB:Q7ZU34 (1) 478 aa
    Sequence Clusters UniGene:77675 (1)
    Sequence Information (all 31)
    ORTHOLOGY for gabpa ( Chr: 9 )
    CITATIONS (27)