ZFIN ID: ZDB-GENE-010328-1
Gene Name: claudin a
Gene Symbol: cldna
Sequence Ontology ID : SO:0000704

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Previous Names: fb99d09, wu:fb99d09 (1)

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(Including Attributions)
Location: Chr: 15 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 22 figures from 16 publications
Wild-type Stages, Structures: Segmentation:5-9 somites (11.66h-14.0h) to Adult (90d-730d, breeding adult)
  eye, otic placode, otic vesicle, otolith (all 10) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la019278Tg Transgenic Insertion Unknown Unknown DNA
PHENOTYPE No data available
DISEASE ASSOCIATED WITH cldna HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component bicellular tight junction (more)
Molecular Function structural molecule activity (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004031 (1)
  • InterPro:IPR006187 (1)
  • Pfam:PF00822 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cldna-001 (1) 1943
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cldna No data available
    MARKER RELATIONSHIPS
    cldnaContained in: [BAC] CH211-235M3 (1) (order this)
    cldnaEncodes: [EST] fb99d09 (1)
    [cDNA] MGC:77747 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131762 (1) 1882bp
    Genomic GenBank:CR382327 (1) 151282bp
    Select Tool
    Polypeptide UniProtKB:Q6P0U4 (1) 206aa
    Sequence Clusters UniGene:77880 (1)
    Sequence Information (all 14)
    OTHER cldna GENE PAGES
  • Alliance (1)
  • Gene:81580 (1)
  • VEGA:OTTDARG00000020670 (1)
  • Ensembl(GRCz10):ENSDARG00000069888 (1)
  • ORTHOLOGY for cldna (Chr: 15)
    CITATIONS (44)