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ZIRC
ZFIN ID: ZDB-GENE-001103-2
Gene Name: SRY-box transcription factor 9b
Gene Symbol: sox9b
Sequence Ontology ID : SO:0000704

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Previous Names: fb18d01, wu:fb18d01 (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific. Involved in several processes, including animal organ development; embryonic pectoral fin morphogenesis;  ...
GENE EXPRESSION
All Expression Data: 103 figures from 77 publications
Directly Submitted Expression Data: 6 figures (10 images) from Thisse et al., 2004 [MGC:76805]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fh313 Point Mutation Unknown Premature Stop ENU
  • China Zebrafish Resource Center (CZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40193 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sox9b_unrecovered Point Mutation Unknown Unknown ENU
    sox9b_unspecified Unspecified Unknown Unknown
    Targeting reagents:
    DISEASE ASSOCIATED WITH sox9b HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    campomelic dysplasia Acampomelic campomelic dysplasia 114290
    Campomelic dysplasia 114290
    Campomelic dysplasia with autosomal sex reversal 114290
    DISEASE ASSOCIATED WITH sox9b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process inner ear development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 26)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sox9b-201 (1) 3419
    sox9b-202 (1) 864
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    sox9bContained in: [Fosmid] CH1073-175H21 (1) (order this)
    sox9bEncodes: [EST] fb18d01 (1)
    [cDNA] MGC:76805 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131644 (1) 1916bp
    Genomic GenBank:CU855796 (1) 35870bp
    Select Tool
    Polypeptide UniProtKB:Q9DFH1 (1) 407aa
    Sequence Clusters UniGene:114501 (1)
    Sequence Information (all 24)
    ORTHOLOGY for sox9b (Chr: 3)
    CITATIONS (176)