ZFIN ID: ZDB-GENE-000830-1
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Gene Name: NK2 homeobox 4b
Gene Symbol: nkx2.4b
Sequence Ontology ID : SO:0000704

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Previous Names: nk2.1a (1), nkx2.1 (1), nkx2.1a, nkx2.4a (1), titf1, titf1a (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 73 figures from 46 publications
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23811 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nkx2.4b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nkx2.4b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process hypothalamus development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
    		•
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
    		•
  • Pfam:PF00046 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nkx2.4b-001 (1) 1151
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nkx2.4b No data available
    MARKER RELATIONSHIPS
    nkx2.4bContained in: [BAC] DKEY-165F9 (1) (order this)
    nkx2.4bEncodes: [cDNA] MGC:193896 (1) (order this), MGC:193913 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131589 (1) 1175bp
    Select Tool
    Genomic GenBank:CT573061 (1) 79800bp
    Select Tool
    Polypeptide UniProtKB:A5WVY6 (1) 307aa
    Select Tool
    Sequence Clusters UniGene:82318 (1)
    Sequence Information (all 19)
    OTHER nkx2.4b GENE PAGES
  • Alliance (1)
  • Gene:58112 (1)
  • VEGA:OTTDARG00000023367 (1)
  • Ensembl(GRCz11):ENSDARG00000104107 (1)
    • ORTHOLOGY for nkx2.4b (Chr: 20)
    CITATIONS (100)