ZFIN ID: ZDB-GENE-000823-7
Gene Name: homeobox B6b
Gene Symbol: hoxb6b
Sequence Ontology ID : SO:0000704

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Previous Names: hoxa7, z-5

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
GENE EXPRESSION
All Expression Data: 18 figures from 11 publications
Directly Submitted Expression Data: 7 figures (25 images) from Thisse et al., 2005 [eu750]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH hoxb6b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH hoxb6b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process multicellular organism development (more)
Cellular Component nucleus (more)
Molecular Function DNA binding (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR001827 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR017995 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS00032 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxb6b-001 (1) 1194
    ottdart00000001799 (1) 1007
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxb6b No data available
    MARKER RELATIONSHIPS
    hoxb6bContained in: [BAC] DKEY-11C5 (1) (order this)
    [PAC] BUSM1-227H09 (2) (order this)
    hoxb6bEncodes: [EST] eu750 (1)
    [cDNA] MGC:194274 (1) (order this), MGC:194296 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131538 (1) 987bp
    Genomic GenBank:BX001014 (1) 193523bp
    Select Tool
    Polypeptide UniProtKB:B3DHS2 (1) 224aa
    Sequence Clusters UniGene:59927 (1)
    Sequence Information (all 27)
    OTHER hoxb6b GENE PAGES
  • Alliance (1)
  • Gene:58053 (1)
  • VEGA:OTTDARG00000001685 (1)
  • VEGA:OTTDARG00000020592 (1)
  • ORTHOLOGY for hoxb6b (Chr: 12)
    CITATIONS (47)