ZFIN ID: ZDB-GENE-000823-2
Gene Name: homeobox A9b
Gene Symbol: hoxa9b
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: Hoxa-9, zgc:110504

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 11 figures from 8 publications
Wild-type Stages, Structures: Blastula:256-cell (2.5h-2.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la027699Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6422 Point Mutation Unknown Premature Stop ENU
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH hoxa9b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH hoxa9b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process multicellular organism development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001356 (1)
  • InterPro:IPR006711 (1)
  • InterPro:IPR009057 (1)
  • InterPro:IPR017112 (1)
  • InterPro:IPR017970 (1)
  • InterPro:IPR020479 (1)
  • PROSITE:PS00027 (1)
  • PROSITE:PS50071 (1)
  • Pfam:PF00046 (1)
  • Pfam:PF04617 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA hoxa9b-001 (1) 1495
    ottdart00000001849 (1) 726
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM hoxa9b No data available
    MARKER RELATIONSHIPS
    hoxa9bContained in: [BAC] DKEY-45E15 (1) (order this)
    [PAC] BUSM1-31B14 (1) (order this)
    hoxa9bEncodes: [cDNA] MGC:110504 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131533 (1) 777bp
    Genomic GenBank:CR392024 (1) 183486bp
    Select Tool
    Polypeptide UniProtKB:F1QQN5 (1) 253aa
    Sequence Clusters UniGene:88308 (1)
    Sequence Information (all 21)
    OTHER hoxa9b GENE PAGES
  • Alliance (1)
  • Gene:58048 (1)
  • VEGA:OTTDARG00000001731 (1)
  • VEGA:OTTDARG00000027643 (1)
  • Ensembl(GRCz11):ENSDARG00000056819 (2)
  • ORTHOLOGY for hoxa9b (Chr: 16)
    CITATIONS (57)