Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-000509-1
Gene Name: aryl hydrocarbon receptor nuclear translocator-like 1a
Gene Symbol: arntl1a
Previous Names: bmal1, hif1b (1), zfBMAL1 (1), fa04g03, wu:fa04g03 (1)
Location: Chr: 25   Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 13 figures from 8 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55263]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTANTS AND TARGETED KNOCKDOWNS
Mutant lines: 1 genotype
Alleles: ct803, sa24645
Knockdown reagents: MO1-arntl1a (1), MO2-arntl1a (1)
PHENOTYPE
Data: 2 figures from Jensen et al., 2012
Observed in: intersegmental vessel
GENE ONTOLOGY
Ontology GO Term
Biological Process negative regulation of transcription, DNA-templated (more)
Cellular Component transcription factor complex (more)
Molecular Function CONTRIBUTES_TO DNA binding (more)
GO Terms (all 19)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000014 (1)
  • InterPro:IPR001067 (1)
  • InterPro:IPR001610 (1)
  • InterPro:IPR011598 (1)
  • InterPro:IPR013767 (1)
  • PROSITE:PS50112 (1)
  • PROSITE:PS50888 (1)
  • Pfam:PF00010 (1)
  • Pfam:PF00989 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA arntl1a-001 (1) 2343
    arntl1a-002 (1) 2326
    GENE PRODUCT DESCRIPTION
    ANTIBODIES No data available
    CONSTRUCTS WITH SEQUENCES FROM arntl1a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    arntl1a Contained in: [BAC] CH211-244M13 (1) (order this)
    arntl1a Encodes: [EST] fa04g03 (1)
    [cDNA] MGC:55263 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131577 (1) 2343 bp
    Genomic GenBank:CR759966 (1) 142946 bp
    Select Tool
    Polypeptide UniProtKB:Q7ZU37 (1) 626 aa
    Sequence Clusters UniGene:75458 (1)
    Sequence Information (all 17)
    OTHER arntl1a GENE PAGES
  • Gene:58098 (1)
  • VEGA:OTTDARG00000035549 (1)
  • Ensembl(Zv9):ENSDARG00000006791 (1)
  • ORTHOLOGY
      Evidence
    Species Symbol Chr (Position) Accession # AA CL
    Zebrafish arntl1a 25  
    Human ARNTL 11 (11p15)
  • OMIM:602550
  • Gene:406
  • Mouse Arntl 7 ( 59.17 cM)
  • MGI:1096381
  • Gene:11865
  • Orthology Details
    CITATIONS (36)