ZFIN ID: ZDB-GENE-000427-7
Gene Name: T-box 20
Gene Symbol: tbx20
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: ZF-TBX20 (1), cb826 (1), hrt, hrT (1), whz

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA binding activity and DNA-binding activity transcription factor activity; involved in several processes, including animal organ development, negative regulation of transcription,  ...
GENE EXPRESSION
All Expression Data: 60 figures from 47 publications
Directly Submitted Expression Data: 6 figures (21 images) from Thisse et al., 2001 [cb826]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la1110 Point Mutation Unknown Premature Stop ENU
m245 Point Mutation Unknown Stop Loss ENU
sa42797 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 17 figures from 6 publications
    Observed in:
    DISEASE ASSOCIATED WITH tbx20 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    atrial heart septal defect 4 Atrial septal defect 4 611363
    DISEASE ASSOCIATED WITH tbx20 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process blood vessel development (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001699 (1)
  • InterPro:IPR008967 (1)
  • InterPro:IPR018186 (1)
  • InterPro:IPR036960 (1)
  • PROSITE:PS01264 (1)
  • PROSITE:PS01283 (1)
  • PROSITE:PS50252 (1)
  • Pfam:PF00907 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbx20-001 (1) 2126
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tbx20
    MARKER RELATIONSHIPS
    tbx20Contained in: [BAC] CH211-215K15 (1) (order this)
    tbx20Encodes: [EST] cb826 (1) (order this)
    [cDNA] MGC:194995 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131506 (1) 2134bp
    Genomic GenBank:CR391962 (1) 144859bp
    Select Tool
    Polypeptide UniProtKB:B3DJG4 (1) 446aa
    Sequence Clusters UniGene:8231 (1)
    Sequence Information (all 19)
    OTHER tbx20 GENE PAGES
  • Alliance (1)
  • Gene:57936 (1)
  • VEGA:OTTDARG00000021108 (1)
  • Ensembl(GRCz11):ENSDARG00000005150 (2)
  • ORTHOLOGY for tbx20 (Chr: 16)
    CITATIONS (99)