ZFIN ID: ZDB-GENE-000330-8
Gene Name: coilin p80
Gene Symbol: coil    Nomenclature History

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Previous Names: CLN80 (1), wu:fb08h11 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have U1 snRNA binding activity and U2 snRNA binding activity. Involved in Cajal body organization and spliceosomal snRNP assembly. Predicted to localize to Cajal body. Is expressed widely. Orthologous to human COIL (coilin).
Genome Resources: Alliance (1),  Gene:58024 (1),  Ensembl(GRCz11):ENSDARG00000040070 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56008]
  1 figure (1 image) from Thisse et al., 2005 [eu83]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7162766]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-coil N/A 1
MO2-coil N/A 1
DISEASE ASSOCIATED WITH coil HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH coil VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Cajal body organization (more)
Cellular Component Cajal body (more)
Molecular Function U1 snRNA binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA coil-201 (1)    Ensembl 2109
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-coil polyclonal Rabbit IHC 3
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM coil No data available
MARKER RELATIONSHIPS
coil Contained in: [BAC] CH73-236K11 (1), CH211-234H8 (1)
coil Encodes: [EST] eu83 (1), fb08h11 (1), IMAGE:7162766 (1)
[cDNA] MGC:56008 (1), MGC:191864 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_131512 (1) 2026 nt
Genomic GenBank:BX897685 (1) 179286 nt
Select Tool
Polypeptide UniProtKB:B0S7K8 (1) 532 aa
Sequence Information (all 23)
ORTHOLOGY for coil ( Chr: 3 )
CITATIONS (24)