header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-000330-8
Gene Name: coilin p80
Gene Symbol: coil
Sequence Ontology ID : SO:0001217

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: CLN80 (1), wu:fb08h11 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have U1 snRNA binding activity and U2 snRNA binding activity. Involved in Cajal body organization and spliceosomal snRNP assembly. Predicted to localize to the Cajal body. Is expressed  ...
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56008]
  1 figure (1 image) from Thisse et al., 2005 [eu83]
  1 figure (1 image) from Thisse et al., 2004 [IMAGE:7162766]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
DISEASE ASSOCIATED WITH coil HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH coil VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process Cajal body organization (more)
Cellular Component Cajal body (more)
Molecular Function U1 snRNA binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR024822 (1)
  • InterPro:IPR031722 (1)
  • Pfam:PF15862 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA coil-201 (1) 2109
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM coil No data available
    MARKER RELATIONSHIPS
    coil Contained in: [BAC] CH73-236K11 (1) (order this), CH211-234H8 (1) (order this)
    coil Encodes: [EST] eu83 (1), fb08h11 (1), IMAGE:7162766 (1) (order this)
    [cDNA] MGC:56008 (1) (order this), MGC:191864 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131512 (1) 2026 bp
    Genomic GenBank:BX897685 (1) 179286 bp
    Select Tool
    Polypeptide UniProtKB:B0S7K8 (1) 532 aa
    Sequence Clusters UniGene:8425 (1)
    Sequence Information (all 24)
    ORTHOLOGY for coil ( Chr: 3 )
    CITATIONS (23)