ZFIN ID: ZDB-GENE-000208-8
Gene Name: COPI coat complex subunit gamma 2
Gene Symbol: copg2    Nomenclature History

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Previous Names: copg, cb943 (1), fi31b06, gamma-cop, wu:fi31b06 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have structural molecule activity. Predicted to be involved in Golgi vesicle transport; organelle transport along microtubule; and protein secretion. Predicted to localize to the Golgi apparatus; endoplasmic reticulum; and endoplasmic reticulum-Golgi intermediate compartment. Is expressed in several structures, including axis; notochord; periderm; polster; and solid lens vesicle. Orthologous to several human genes including COPG2 (COPI coat complex subunit gamma 2).
Genome Resources: Alliance (1),  Gene:30187 (1),  Ensembl(GRCz11):ENSDARG00000034823 (2)
GENE EXPRESSION
All Expression Data: 9 figures from 4 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56111]
  6 figures (8 images) from Thisse et al., 2001 [cb943]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH copg2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH copg2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process intracellular protein transport (more)
Cellular Component COPI vesicle coat (more)
Molecular Function structural molecule activity (more)
GO Terms (all 17)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
Domain IPR013040 Coatomer, gamma subunit, appendage, Ig-like subdomain
Domain IPR032154 Coatomer subunit gamma, C-terminal
Family IPR017106 Coatomer gamma subunit
Homologous_superfamily IPR009028 Coatomer/calthrin adaptor appendage, C-terminal subdomain
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR012295 TBP domain superfamily
Homologous_superfamily IPR013041 Clathrin adaptor, appendage, Ig-like subdomain superfamily
Homologous_superfamily IPR016024 Armadillo-type fold
Homologous_superfamily IPR037067 Coatomer, gamma subunit, appendage domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA copg2-201 (1)    Ensembl 2977
ncRNA copg2-002 (1) 492
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM copg2 No data available
MARKER RELATIONSHIPS
copg2 Contained in: [BAC] CH211-285D14 (1), DKEY-117N7 (1) (order this)
copg2 Encodes: [EST] cb943 (1) (order this), fi31b06 (1)
[cDNA] MGC:56111 (1), MGC:111940 (1), MGC:193067 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_130994 (1) 2893 nt
Genomic GenBank:BX004864 (1) 153799 nt
Select Tool
Polypeptide UniProtKB:B2GRP4 (1) 873 aa
Sequence Information (all 32)
ORTHOLOGY for copg2 ( Chr: 4 )
CITATIONS (30)