Gene
prpf39
- ID
- ZDB-GENE-030616-420
- Name
- PRP39 pre-mRNA processing factor 39 homolog (yeast)
- Symbol
- prpf39 Nomenclature History
- Previous Names
-
- fa10d07
- si:dz261o22.3
- wu:fa10d07
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to contribute to pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to localize to U1 snRNP; U2-type prespliceosome; and commitment complex. Orthologous to human PRPF39 (pre-mRNA processing factor 39).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2005
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu1074 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | HAT (Half-A-TPR) repeat | Suppressor of forked | Tetratricopeptide-like helical domain superfamily |
|---|---|---|---|---|
|
UniProtKB:A0A8M3B4E2
|
381 | |||
|
UniProtKB:Q1JPZ7
|
752 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA | prpf39-001 (1) | Havana | 2,588 nt | ||
| mRNA |
prpf39-201
(1)
|
Ensembl | 3,797 nt |
Interactions and Pathways
No data available
Plasmids
No data available