Transcript

prpf39-201

ID
ZDB-TSCRIPT-091110-1356
Name
prpf39-201 Nomenclature History
Previous Names
  • ch211-155i15.6-001
  • ottdart00000045020
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000170482 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000170482.2|gene_biotype:protein_coding|ENSDARG00000100209.2 transcript_biotype:protein_coding gene_symbol:prpf39 cdna chromosome:GRCz11:20:54213688:54245256:-1
ATGGAAGATTCCGGTGAGTCAATGACCGGGATGTTGGACT
CGAAATCCCCGGAAAGCGGGGACTCTCCTGCTATGGAGGG
CACAACGGGGACTGATGATGTCACAGGCTTGAGCACGTCC
GATTTGACGACAGAACAACCCCCAGAAAGCCAGGAGCAGA
CCCAGCCGGTGTCCGACATGGAGTTTTCGGTGGAGCATTT
AAAGACTGCGGTACAGAACATTGACCAAAGTGCCAGTCCT
GCAGAACCTGCTGCGGAAAACTCTGAGCAGCCGCCAGAGT
CAAACGGACAGCAAGAGGACCAATCAGAACAGCCGGATGA
TGTGAAGGAGGCGGGACAAGGTGACTCTGAGAGTCCCTCC
AATATGGAGCTGGAGGACGCGCCGAAAGAGCCAGCCGAAC
CCGCAGCAGAAGCAGATCCAGCGGCGCCACAAGAACCAGA
ACTTCCCACAGAATATGAGCGTTTGTCCAAGGTTGTGGAA
GATAATCCTGAAGACTTCAATGGCTGGGTTTACCTCCTGC
AGTATGTTGAACAAGAGAACCACCTTCTTGGCTCAAGAAA
AGCATTCGATGCATTTTTCCTGCACTATCCCTACTGTTAC
GGCTACTGGAAGAAATATGCAGATATCGAGAGGAAACACG
GCTACATTCAGATGGCCGATGAGGTGTACCGTCGAGGTCT
GCAGGCCATTCCTCTGAGCGTCGACCTGTGGCTTCATTAC
ATCACTTTCCTAAGAGAGAATCAAGACACCAGCGATGGAG
AGGCTGAGAGTCGCATCAGGGCGTCCTATGAGCATGCAGT
TCTGGCCTGCGGGACAGATTTCCGCTCGGACCGTCTGTGG
GAGGCTTATATCGCATGGGAGACGGAGCAAGGGAAGCTGG
CCAATGTCACCGCCATCTACGACCGTCTGCTCTGCATTCC
CACACAGCTGTACTCGCAGCATTTCCAGAAGTTTAAAGAC
CACGTGCAGAGCAACAACCCCAAGCACTTCCTGTCAGAAG
AGGAGTTCGTGTCGTTGCGAGTGGAGCTGGCGAATGCAAA
TAAACCCAGCGGAGACGAGGACGCAGAGACTGAAGCTCCT
GGGGAAGAACTGCCGCCAGGCACCGAGGACCTGCCAGACC
CTGCTAAGAGAGTGACGGAGATCGAGAACATGCGGCACAA
AGTGATCGAGACGCGCCAGGAGATGTTCAACCACAACGAG
CACGAAGTCAGCAAACGCTGGGCCTTCGAGGAGGGGATCA
AGCGTCCGTATTTCCACGTCAAAGCGCTGGAGAAGACGCA
GCTGAACAACTGGCGGGAGTACCTGGATTTTGAGCTGGAG
AACGGGACGCCGGAGCGGGTAGTGGTGCTGTTCGAGCGCT
GTCTGATCGCCTGCGCGCTCTACGAGGAGTTCTGGATCAA
GTACGCCAAGTATCTGGAGAGCTACAGCACTGAAGCTGTT
CGCCACATCTACAAGAAGGCCTGCACCGTCCACCTGCCCA
AAAAACCCAACGTTCACCTGCTCTGGGCCGCCTTTGAGGA
GCAGCAGGGCAGCATCGATGAGGCACGCAGCATCCTGAAG
GCGGTGGAGGTTTCAGTGCCGGGTCTGGCGATGGTTCGCC
TGCGGCGGGTCAGTCTGGAGCGCCGGCACGGGAACATGGA
GGAGGCGGAAGCTCTGCTGCAGGACGCCATCACCAACGGG
AGGAACAGCAGCGAGTCCTCCTTCTACAGCGTCAAACTTG
CCCGACAGCTAGTCAAAGTGCAGAAGAGCATCGGCAGGGC
CAAGAAGGTGCTGCTGGAGGCTGTGGAGAAAGATGAGACG
AACCCGAAGCTGTACCTGAATCTGCTGGAGCTGGAGTACA
GCGGAGACGTGCAGCAGAACGAAGCTGAAATCATCGCCTG
TTTCGACCGCGCGCTCAGCAGCTCCATGGCTCTGGAGTCA
CGCATCACTTTCTCTCAACGAAAGGTGGACTTTCTGGAGG
ACTTCGGCAGCGACATCAACACGCTGATGGCAGCGTATGA
GCAGCACCAGAGGCTACTGGCGGAGCAGGAGTCCTTCAAG
AGGAAAGCAGAGAACGGCTCAGAGGAGCCGGATGCGAAGC
GTCAGCGCACAGATGATCAATCCGTAGCATCCGGTCAGAT
GATGGACATGCAGGCCAATCATGCGGGATACAACTATAAC
AACTGGTATCAGTATAACTCGTGGGGCTCTCAGAACTCCT
GGGGTCAGTACGGTCAGTATGGTCAGTATAACCAGTACTA
CCCTCCGCCGCCCACATAACAGCCCAGCCTCGGCTTCAGC
TTCAGACATTGTGTGTTTTCTGTTCTCCGCGCCTCCCTCA
GTGAGTCTTTTAGTGCTAAAGGAGTTTAGTTTTGTTCGTC
TGGAAGGATTGGAGCTCCTCGCCTCCTCCTCAAACTCACC
TTCATTTCAGAGTAACATCAAGACGCTTTTTTATTTTGAC
TGGGTTTCATAATAAAGAGATTGACATCCTACACTGCTGT
CTGTGTGTTATTGTCTTTAATTGTGTGAACACGCTCAGGT
CAAACTGACCCGCCTTCACTAAAGCTCTAACATAAAGCAG
AAGCGTTTAGTTTCAGTGCTCAGATCCATTCTGCATGAAG
AAACAAGCTGATCTTCACACACACACACACACACACTGTG
AGTGTTGTATTGTTTCCTCATCAGTGTGCAGTATATCAGC
AGTGTTCACTCAGTGGACAACACTCGACTCTCACTGCAGA
ACTACAGACGGATGTTAAGATGAAGCAGATTCTGTCTGTG
TGTTGGAGTGTTTCTAACATTGAGGTCATTTTAGACGGTC
ACCAGATCTCAGAACAGCTGAGTTTATTTTCCTGCTGTTG
AAATGGTGCCTGGGTGATTTTCAGCAGTGTGATGACATCA
TCTGATTAATATTCAGTCATCAGCCGTCACTGTAAAAAGG
GGAAACGTAAGCAAATTACTCTGACTGGTCACAATTAAAT
GAATAACGTTTGTCAAACTTAATTTATAACCGTTTTCAGT
AATGCATTTTGGTATTTAAGGCAGGGGTTCCCAAACTTTT
CAGCCCGCGAGCCCCAAAATAACAATGCCAGCGACTCACA
ACCCCCAATATCCTCTGAGGTGGTTATAAATACTGAAGCC
TTGCATGCAATGGCGCGCGCACACCCACACACACCAATAG
ACCCAAGTCTACTCTTTATTTACTTCTTTAATGTATGCGA
GTGCTGTAAATGGGCCAGGAAGTAACCTGCTGTTATGAAA
TCAATCTGCTGCATCTGACGCCATTGCTGTGTCTTTAATA
TAATGTAACTACCCCAGGGGTCGCAATCCAATACAACTAT
TTACTGTAAGCTACTATAGTAACTATATAGCAAACAGTGA
CTATAAACGGTTATGGATGAAATATGCTAACTCTCATGGT
TTAATAAAAATAATTAGATTTTTGGAAATGACCAGGTGAC
GTCCTCCCCCTTCATTAGAGAGGGGTCTGGCTGCAGACTC
GGTGCAGTGCAATCTGAGCTGCATCAAATGCTATTCAATG
CGCTCACCTACCCCTCACAGTGACGTCACTCCATTGAGTG
CATTGTGTCTGACAATGCATCGCTGAGTGATGCAACCTCA
GCTTGCATCATAAAGGCTGCAGCCAGATGCTATTGTTTCA
TTGTCCTCACTTTGAGAACCGCTGCTTTAGGGTTATCAGG
TTTATTTGCGGCGAGTATAAGTATTGTTCACTGTCAATAA
TGAGCAATACTTTTATTTGCCTACAAAGAAAGTGATATTT
TTATATAAACAAGGGAAGGGAATTATTAGTACTGTAA

OTTDART00000045020 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000045020|OTTDARG00000032267|ZDB-GENE-030616-420 prpf39|OTTDARP00000035596 prpf39-001 LG_none CU856337.11,CU693483.5 Danio rerio protein_coding KNOWN, 2584 bp
ATTCGTGTCCTTTTCGACACAGCACGACGGAACGCGGCCG
CTCGACCACATGTGTTCAGCCGCATAAAACTTCAAAGAAC
TCGTGAAAATATCTGCCGGTTTAACCGAGTTTCATGGAAG
ATTCCGGTGAGTCAATGACCGGGATGTTGGACTCGAAATC
CCCGGAAAGCGGGGACTCTCCTGCTATGGAGGGCACAACG
GGGACTGATGATGTCACAGGCTTGAGCACGTCCGATTTGA
CGACAGAACAACCCCCAGAAAGCCAGGAGCAGACCCAGCC
GGTGTCCGACATGGAGTTTTCGGTGGAGCATTTAAAGACT
GCGGTACAGAACATTGACCAAAGTGCCAGTCCTGCAGAAC
CTGCTGCGGAAAACTCTGAGCAGCCGCCAGAGTCAAACGG
ACAGCAAGAGGACCAATCAGAACAGCCGGATGATGTGAAG
GAGGCGGGACAAGGTGACTCTGAGAGTCCCTCCAATATGG
AGCTGGAGGACGCGCCGAAAGAGCCAGCCGAACCCGCAGC
AGAAGCAGATCCAGCGGCGCCACAAGAACCAGAACTTCCC
ACAGAATATGAGCGTTTGTCCAAGGTTGTGGAAGATAATC
CTGAAGACTTCAATGGCTGGGTTTACCTCCTGCAGTATGT
TGAACAAGAGAACCACCTTCTTGGCTCAAGAAAAGCATTC
GATGCATTTTTCCTGCACTATCCCTACTGTTACGGCTACT
GGAAGAAATATGCAGATATCGAGAGGAAACACGGCTACAT
TCAGATGGCCGATGAGGTGTACCGTCGAGGTCTGCAGGCC
ATTCCTCTGAGCGTCGACCTGTGGCTTCATTACATCACTT
TCCTAAGAGAGAATCAAGACACCAGCGATGGAGAGGCTGA
GAGTCGCATCAGGGCGTCCTATGAGCATGCAGTTCTGGCC
TGCGGGACAGATTTCCGCTCGGACCGTCTGTGGGAGGCTT
ATATCGCATGGGAGACGGAGCAAGGGAAGCTGGCCAATGT
CACCGCCATCTACGACCGTCTGCTCTGCATTCCCACACAG
CTGTACTCGCAGCATTTCCAGAAGTTTAAAGACCACGTGC
AGAGCAACAACCCCAAGCACTTCCTGTCAGAAGAGGAGTT
CGTGTCGTTGCGAGTGGAGCTGGCGAATGCAAATAAACCC
AGCGGAGACGAGGACGCAGAGACTGAAGCTCCTGGGGAAG
AACTGCCGCCAGGCACCGAGGACCTGCCAGACCCTGCTAA
GAGAGTGACGGAGATCGAGAACATGCGGCACAAAGTGATC
GAGACGCGCCAGGAGATGTTCAACCACAACGAGCACGAAG
TCAGCAAACGCTGGGCCTTCGAGGAGGGGATCAAGCGTCC
GTATTTCCACGTCAAAGCGCTGGAGAAGACGCAGCTGAAC
AACTGGCGGGAGTACCTGGATTTTGAGCTGGAGAACGGGA
CGCCGGAGCGGGTAGTGGTGCTGTTCGAGCGCTGTCTGAT
CGCCTGCGCGCTCTACGAGGAGTTCTGGATCAAGTACGCC
AAGTATCTGGAGAGCTACAGCACTGAAGCTGTTCGCCACA
TCTACAAGAAGGCCTGCACCGTCCACCTGCCCAAAAAACC
CAACGTTCACCTGCTCTGGGCCGCCTTTGAGGAGCAGCAG
GGCAGCATCGATGAGGCACGCAGCATCCTGAAGGCGGTGG
AGGTTTCAGTGCCGGGTCTGGCGATGGTTCGCCTGCGGCG
GGTCAGTCTGGAGCGCCGGCACGGGAACATGGAGGAGGCG
GAAGCTCTGCTGCAGGACGCCATCACCAACGGGAGGAACA
GCAGCGAGTCCTCCTTCTACAGCGTCAAACTTGCCCGACA
GCTAGTCAAAGTGCAGAAGAGCATCGGCAGGGCCAAGAAG
GTGCTGCTGGAGGCTGTGGAGAAAGATGAGACGAACCCGA
AGCTGTACCTGAATCTGCTGGAGCTGGAGTACAGCGGAGA
CGTGCAGCAGAACGAAGCTGAAATCATCGCCTGTTTCGAC
CGCGCGCTCAGCAGCTCCATGGCTCTGGAGTCACGCATCA
CTTTCTCTCAACGAAAGGTGGACTTTCTGGAGGACTTCGG
CAGCGACATCAACACGCTGATGGCAGCGTATGAGCAGCAC
CAGAGGCTACTGGCGGAGCAGGAGTCCTTCAAGAGGAAAG
CAGAGAACGGCTCAGAGGAGCCGGATGCGAAGCGTCAGCG
CACAGATGATCAATCCGTAGCATCCGGTCAGATGATGGAC
ATGCAGGCCAATCATGCGGGATACAACTATAACAACTGGT
ATCAGTATAACTCGTGGGGCTCTCAGAACTCCTGGGGTCA
GTACGGTCAGTATGGTCAGTATAACCAGTACTACCCTCCG
CCGCCCACATAACAGCCCAGCCTCGGCTTCAGCTTCAGAC
ATTGTGTGTTTTCTGTTCTCCGCGCCTCCCTCAGTGAGTC
TTTTAGTGCTAAAGGAGTTTAGTTTTGTTCGTCTGGAAGG
ATTGGAGCTCCTCGCCTCCTCCTCAAACTCACCTTCATTT
CAGAGTAACATCAAGACGCTTTTTTATTTTGACTGGGTTT
CATAATAAAGAGATTGACATCCTA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations