ZFIN ID: ZDB-GENE-030616-420

ZFIN ID: ZDB-GENE-030616-420

Mapping Details

Gene Name:	PRP39 pre-mRNA processing factor 39 homolog (yeast)
Symbol:	prpf39

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	20	54,213,688 - 54,245,256	GRCz11
Ensembl	20	54,213,688 - 54,245,256	GRCz11
Vega	20	54,478,484 - 54,508,839	GRCv10
NCBI Map Viewer	20	54,215,014 - 54,245,372	GRCz11
UCSC	20	-	GRCz11

Mapped Clones containing prpf39
BUSM1-261O22	Chr: 20 Details
ZFOS-2171E4	Chr: 20 Details
ZFOS-1053B4	Chr: 20 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa6660	20	54,233,156	GRCz11	Busch-Nentwich et al., 2013
	20	54,490,697	GRCz10	Busch-Nentwich et al., 2013
	20	54,623,533	Zv9	Busch-Nentwich et al., 2013
sa13245	20	54,242,499	GRCz11	Busch-Nentwich et al., 2013
	20	54,481,354	GRCz10	Busch-Nentwich et al., 2013
	20	54,632,876	Zv9	Busch-Nentwich et al., 2013
sa23827	20	54,233,053	GRCz11	Busch-Nentwich et al., 2013
	20	54,490,800	GRCz10	Busch-Nentwich et al., 2013
	20	54,623,430	Zv9	Busch-Nentwich et al., 2013
sa23828	20	54,242,179	GRCz11	Busch-Nentwich et al., 2013
	20	54,481,674	GRCz10	Busch-Nentwich et al., 2013
	20	54,632,556	Zv9	Busch-Nentwich et al., 2013
sa37189	20	54,220,075	GRCz11	Busch-Nentwich et al., 2013
	20	54,503,778	GRCz10	Busch-Nentwich et al., 2013
	20	54,610,452	Zv9	Busch-Nentwich et al., 2013
sa45722	20	54,242,103	GRCz11	Busch-Nentwich et al., 2013
	20	54,481,750	GRCz10	Busch-Nentwich et al., 2013
	20	54,632,480	Zv9	Busch-Nentwich et al., 2013
sa6660	20		GRCz11
	20		GRCz11
	20		GRCz11
sa13245	20		GRCz11
	20		GRCz11
	20		GRCz11
sa23827	20		GRCz11
	20		GRCz11
	20		GRCz11
sa23828	20		GRCz11
	20		GRCz11
	20		GRCz11
sa37189	20		GRCz11
	20		GRCz11
	20		GRCz11
sa45722	20		GRCz11
	20		GRCz11
	20		GRCz11

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
20	152.5 cM	prpf39	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available