ZFIN is now using GRCz12tu for Genomic Data
Gene
slx4ip
- ID
- ZDB-GENE-040426-1365
- Name
- SLX4 interacting protein
- Symbol
- slx4ip Nomenclature History
- Previous Names
-
- zgc:64090
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in eye; optic tectum; proliferative region; retina; and ventricular zone. Orthologous to human SLX4IP (SLX4 interacting protein).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:64090 (11 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR031479 | Protein SLX4IP |
Domain Details Per Protein
| Protein | Additional Resources | Length | Protein SLX4IP |
|---|---|---|---|
| UniProtKB:A0A8M9PXQ6 | InterPro | 461 | |
| UniProtKB:A0A8M6Z289 | InterPro | 423 | |
| UniProtKB:Q7T2B3 | InterPro | 499 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slx4ip-201
(1)
|
Ensembl | 2,681 nt | ||
| mRNA |
slx4ip-203
(1)
|
Ensembl | 2,386 nt | ||
| ncRNA |
slx4ip-002
(1)
|
Ensembl | 740 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers