| ZFIN ID: ZDB-GENE-990621-7 |
| Gene Name: | doublesex and mab-3 related transcription factor 2a |
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| Symbol: | dmrt2a |
PHYSICAL MAP AND BROWSER
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| Mapped Clones containing dmrt2a | |
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| DKEYP-31E5 | Chr: 5 Details |
PHYSICAL MAPPING
| Feature | Chr | Position | Assembly | Source | DetailedSource | Citations |
|---|---|---|---|---|---|---|
| imm003 | 5 | 45,008,440 - 45,008,539 | GRCz11 | DIRECT | Pinto et al., 2018 | |
| sa33689 | 5 | 45,893,420 | GRCz12tu | DIRECT | Sealy et al., 2025 | |
| 5 | 45,009,292 | GRCz11 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 5 | 44,409,139 | GRCz10 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 5 | 46,627,874 | Zv9 | DIRECT | Busch-Nentwich et al., 2013 | ||
| sa40541 | 5 | 45,894,773 | GRCz12tu | DIRECT | Sealy et al., 2025 | |
| 5 | 45,010,645 | GRCz11 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 5 | 44,410,492 | GRCz10 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 5 | 46,629,227 | Zv9 | DIRECT | Busch-Nentwich et al., 2013 | ||
| imm003 | 5 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | ||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | |||
| imm004 | 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | ||
| 5 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| sa33689 | 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | ||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | |||
| 5 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | |||
| sa40541 | 5 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | ||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| 5 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers |
| Chr | Location | Mapped As | Panel | Mapped By | Scoring |
|---|---|---|---|---|---|
| 5 | 111.4 cM | terra | Mother of Pearl (MOP) | Postlethwait, John H. | Data |
| 5 | 236.14 cR | terra | Loeb/NIH/5000/4000 (LN54) | Johnson, Stephen L. | Data |
| 5 | 89.0 cM | terra | Heat Shock (HS) | Woods, Ian G. | Data |
| Note: Physical map location as
displayed in the genome browsers is more precise than linkage map location. Physical map location should be used whenever possible. |
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| Marker | Type | Chr | Distance | Publication / Person | Comments |
|---|---|---|---|---|---|
| z8122 | SSLP | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. | |
| apoa1a | GENE | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. | |
| epd | GENE | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. | |
| zehn1245 | EST | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. | |
| atp1b2b | GENE | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. | |
| ins | GENE | 5 | Rajarao et al., 2002 | Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel. |
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