ZFIN ID: ZDB-GENE-990415-235

Mapping Details

Gene Name:	recombination activating gene 2
Symbol:	rag2

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	25	9,809,947 - 9,813,488	GRCz12tu
NCBI Map Viewer	25	9,809,947 - 9,813,488	GRCz12tu
Ensembl	25	9,010,425 - 9,013,963	GRCz11
NCBI Map Viewer	25	9,010,425 - 9,013,963	GRCz11
UCSC	25	-	GRCz11
Vega	25	8,933,357 - 8,936,895	GRCv10

Mapped Clones containing rag2
CH211-256A21	Chr: 25 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
fb101	25	9,011,592 - 9,011,594	GRCz11	DIRECT		Tang et al., 2014
fb106	25	9,010,770 - 9,014,172	GRCz11	DIRECT		Zhang et al., 2021
sa44245	25	9,812,454	GRCz12tu	DIRECT		Sealy et al., 2025
	25	9,012,931	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	25	8,935,863	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	25	9,241,200	Zv9	DIRECT		Busch-Nentwich et al., 2013
zju302	25	9,012,724	GRCz11	DIRECT		Ji et al., 2021
fb101	25		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
fb106	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	25		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa44245	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	25		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
zju302	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	25		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	25		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
25	128.8 cR	rag2	Loeb/NIH/5000/4000 (LN54)	Johnson, Stephen L.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by rag2
fc85e11 Chr: 25 Details