ZFIN ID: ZDB-GENE-980526-395

Mapping Details

Gene Name:	SRY-box transcription factor 11a
Symbol:	sox11a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	17	35,878,544 - 35,881,841	GRCz11
Ensembl	17	35,878,544 - 35,881,841	GRCz11
Vega	17	35,930,939 - 35,934,236	GRCv10
NCBI Map Viewer	17	35,878,547 - 35,881,807	GRCz11
UCSC	17	-	GRCz11

Mapped Clones containing sox11a
CH211-169B18	Chr: 17 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
ihb607	17	35,881,622 - 35,881,628	GRCz11	Jia et al., 2020
uky4Tg	17	35,881,738 - 35,881,739	GRCz11	Krueger et al., 2022

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
17	89.2 cM	sox11a	Mother of Pearl (MOP)	Postlethwait, John H.	Data
17	266.87 cR	IBD2104	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
17	269.07 cR	sox11a	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
17	3093.0 cR	sox11a	Goodfellow T51 (T51)	Geisler, Robert	Data
17	91.3 cM	sox11a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z6561	SSLP	17		Kappler et al., 2004	Kappler et al. (2004, Proc. Natl. Acad. Sci. USA 101(35):13056-13061) report mapping myob ^ru920 to LG17, between sox11a and fc28b06 on the LN54 and T51 panels.
z7170	SSLP	17		Kappler et al., 2004	Kappler et al. (2004, Proc. Natl. Acad. Sci. USA 101(35):13056-13061) report mapping myob ^ru920 to LG17, between sox11a and fc28b06 on the LN54 and T51 panels.
senp6b	GENE	17		Kappler et al., 2004	Kappler et al. (2004, Proc. Natl. Acad. Sci. USA 101(35):13056-13061) report mapping myob ^ru920 to LG17, between sox11a and fc28b06 on the LN54 and T51 panels.
ru920	Feature	17	1.0 cM	Kappler et al., 2004	Kappler et al. (2004, Proc. Natl. Acad. Sci. USA 101(35):13056-13061) report mapping myob ^ru920 to LG17, between sox11a and fc28b06 on the LN54 and T51 panels.
fc28b06	EST	17		Kappler et al., 2004	Kappler et al. (2004, Proc. Natl. Acad. Sci. USA 101(35):13056-13061) report mapping myob ^ru920 to LG17, between sox11a and fc28b06 on the LN54 and T51 panels.

Markers Encoded by sox11a
fb16g02 Ambiguous Details