ZFIN ID: ZDB-GENE-020416-5

ZFIN ID: ZDB-GENE-020416-5

Mapping Details

Gene Name:	T-box transcription factor 6
Symbol:	tbx6

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	12	4,397,313 - 4,407,839	GRCz12tu
NCBI Map Viewer	12	4,397,313 - 4,407,839	GRCz12tu
Ensembl	12	3,912,544 - 3,923,070	GRCz11
NCBI Map Viewer	12	3,912,544 - 3,923,070	GRCz11
UCSC	12	-	GRCz11
Vega	12	3,875,779 - 3,886,305	GRCv10

Mapped Clones containing tbx6
CH211-136M16	Chr: 12 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa17875	12	4,406,194	GRCz12tu	DIRECT		Sealy et al., 2025
	12	3,921,425	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	12	3,884,660	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	12	4,601,938	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa38869	12	4,405,869	GRCz12tu	DIRECT		Sealy et al., 2025
	12	3,921,100	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	12	3,884,335	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	12	4,601,613	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa41936	12	4,406,458	GRCz12tu	DIRECT		Sealy et al., 2025
	12	3,921,689	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	12	3,884,924	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	12	4,602,202	Zv9	DIRECT		Busch-Nentwich et al., 2013
sud102	12	3,912,472 - 3,912,499	GRCz11	DIRECT		Ban et al., 2019
sud103	12	3,912,494 - 3,912,500	GRCz11	DIRECT		Ban et al., 2019
sud104	12	3,912,464 - 3,912,483	GRCz11	DIRECT		Ban et al., 2019
sud105	12	3,912,483 - 3,912,486	GRCz11	DIRECT		Ban et al., 2019
te314a	12	3,921,103	GRCz11	DIRECT		ZFIN Curated Data
vp43rc1	12	3,917,608 - 3,917,682	GRCz11	DIRECT		Aman et al., 2021
m774	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa17875	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa38869	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa41936	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sud102	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sud103	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sud104	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sud105	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tbx6_unspecified	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
te314a	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ti1	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
vp43rc1	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
y55	12		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	12		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
y66	12		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	12		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	12		GRCz11	OTHER_MAPPING	linkagesDirectMem1

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
z21911	SSLP	12	Nikaido et al., 2002	Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.
z1473	SSLP	12	Nikaido et al., 2002	Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.
z17321	SSLP	12	Nikaido et al., 2002	Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 and z1473, near z21911 on the T51 and LN54 mapping panels.

Chr 12

Nikaido et al., 2002

Nikaido, et al. (2002. Nat Genet 31:195-199.) report mapping tbx24 to LG12 between z17321 ...

Genomic Feature y55 is an allele of tbx6

Marker	Type	Chr	Distance	Publication / Person	Comments
z21911	SSLP	12	2.0 cM	Shaw et al., 2006
y66	Feature	12		Shaw et al., 2006

Genomic Feature y66 is an allele of tbx6

Marker	Type	Chr	Distance	Publication / Person	Comments
z21911	SSLP	12	2.0 cM	Shaw et al., 2006
y55	Feature	12		Shaw et al., 2006

Genomic Feature sa41936 is an allele of tbx6