ZFIN ID: ZDB-GENE-990621-7

Mapping Details

Gene Name:	doublesex and mab-3 related transcription factor 2a
Symbol:	dmrt2a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	5	45,007,962 - 45,011,116	GRCz11
Ensembl	5	45,007,962 - 45,011,116	GRCz11
Vega	5	44,407,809 - 44,410,963	GRCv10
NCBI Map Viewer	5	45,007,962 - 45,011,116	GRCz11
UCSC	5	-	GRCz11

Mapped Clones containing dmrt2a
DKEYP-31E5	Chr: 5 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
imm003	5	45,008,440 - 45,008,539	GRCz11	Pinto et al., 2018
sa33689	5	45,009,292	GRCz11	Busch-Nentwich et al., 2013
	5	44,409,139	GRCz10	Busch-Nentwich et al., 2013
	5	46,627,874	Zv9	Busch-Nentwich et al., 2013
sa40541	5	45,010,645	GRCz11	Busch-Nentwich et al., 2013
	5	44,410,492	GRCz10	Busch-Nentwich et al., 2013
	5	46,629,227	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
5	111.4 cM	terra	Mother of Pearl (MOP)	Postlethwait, John H.	Data
5	236.14 cR	terra	Loeb/NIH/5000/4000 (LN54)	Johnson, Stephen L.	Data
5	89.0 cM	terra	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z8122	SSLP	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
apoa1a	GENE	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
epd	GENE	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
zehn1245	EST	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
atp1b2b	GENE	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.
ins	GENE	5		Rajarao et al., 2002	Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to apoa, ins, terra, epd, and zehn1245 at position 87.8 cM on the HS mapping panel. They confirm this linkage assignment by mapping atp1b2b to LG05 near z8122 on the T51 mapping panel.

Chr 5

Rajarao et al., 2002

Rajarao, et al. (2002. Dev Dyn 223:254-261.) reports mapping atp1b2b to LG05 close to ...

Genomic Feature sa33689 is an allele of dmrt2a