ZFIN ID: ZDB-GENE-010302-1

Mapping Details

Gene Name:	forkhead box C1a
Symbol:	foxc1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	2	838,877 - 841,056	GRCz12tu
NCBI Map Viewer	2	838,877 - 841,056	GRCz12tu
Ensembl	2	686,873 - 689,047	GRCz11
NCBI Map Viewer	2	686,873 - 689,052	GRCz11
UCSC	2	-	GRCz11
Vega	2	814,507 - 816,681	GRCv10

Mapped Clones containing foxc1a
CH1073-434G19	Chr: 2 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
el542	2	688,757 - 688,761	GRCz11	DIRECT	Xu et al., 2018
el543	2	688,752 - 688,768	GRCz11	DIRECT	Xu et al., 2018
mw711	2	688,591 - 688,617	GRCz11	DIRECT	Ferre-Fernández et al., 2020
nju18	2	688,630 - 688,638	GRCz11	DIRECT	Li et al., 2015
nju19	2	687,850 - 687,851	GRCz11	DIRECT	Li et al., 2015
p162	2	688,442	GRCz11	DIRECT	Banerjee et al., 2015
sa10371	2	839,631	GRCz12tu	DIRECT	Sealy et al., 2025
	2	687,627	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	2	815,261	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	2	868,969	Zv9	DIRECT	Busch-Nentwich et al., 2013
ua1017	2	688,761 - 688,767	GRCz11	DIRECT	Whitesell et al., 2019
el542	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
el543	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw711	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw717	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw718	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw719	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw720	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
mw721	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nju18	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nju19	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nju60	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nju80Tg	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nju81Tg	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
p162	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data
ua1017	2		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature nju19 is an allele of foxc1a