Genomic Feature

nju19

ID
ZDB-ALT-150716-2
Name
nju19
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Zhao Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Insertion
Variant Location
Chr 2: 687850 - 687851 (GRCz11) (1) Details
Nucleotide change
-/TAGAAAAATC
Variant Notes
Li et al (2015): 10-bp insertion predicted to encode a truncated Foxc1a protein  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp inserted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GAAATACTGGTTTGGTCAAAATTTGCTGCAGTCATACACAAAAGCCCCCGACGTGCGGTAAATGGGCTGGCTCGGGGGAAACGACATTTGACAGCTGTTATTCCCGTTTACCGGCGAATTATTCAGACCGATTCTCTGCGATTCGAACATCTCTCGAACCGAATGGAAGTTCTGCTGCTGCGCTGGGTACGTCGCGCCTAGATGGCCAATGTCTCCGGCCTGGTTCAGGTACCATGAGGCGAGGCGCCCTTGGTGCGGATGGTGGCCCTCCTGGGCCGAGCTCAGATTCCCGTGGCTCAACGACGACGTGGTGGTCGTGATCGAGTAATCAGGCAGAGTTTCGTCCACGGTGGTAGCGGTGGTCCCCAAGTGGCCCGAGCGATCTCCGCCCGCGTACAAGCTCATGGCCTGCATGTTGCAGTGATAGGTGGCGTTGGAGGTAGTCGAGATAGAGTTCTGGCTGCAGGGCGAGCTGTACACGGACGACTGATTGGGAGAATA
-/TAGAAAAATC ATTCAGGGACAACGTGGGTGTTATACCTGTCCGCGAGGGAGCCACGAGAGACGGGGTGAGCTCTCCGGAGCTGTGCGGCGATCCGCGGAGGGAGGTCATGATGTTGTCCACGCTGAAGCCCTGCGCGGGGGCCTGGTGGTGCTGCTCTCCAGCGCTGTCCAGGCTGAGGGAGCGGGTGGAAGGGATGCTGTGCGGGCTGCCGCTCGACATGCTGCTGCTGCTGTCGGGGCTCTCGATCTTCGGGACGGTGCTTAGCGTGGGCGAAACAGCCTGCGGAGGAGTGGACGTGCCGTTCTCGGTTTTAATGTCCTGAATGCGCACGGGCTGAGAGCCAGGCACCGACTGCTCCTGCTCGCGGGCCTGCGGCTGCGCCTGGCGGGACGGCGCCTCTTTAACACCTCGGTCCTCCTTGTCCTTCATGGCGTCCTTCTTTTTAAATCGCCGTCGTCGCCTCAAAAAGCTGCCGTTCTCAAACATATTATACGAGTCCGGGTCGAGGGT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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