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ZIRC
ZFIN ID: ZDB-GENE-010302-1
Gene Name: forkhead box C1a
Gene Symbol: foxc1a
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
AUTOMATED DESCRIPTION
Exhibits chromatin binding activity. Involved in several processes, including animal organ development; regulation of signal transduction; and vasculature development. Predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
el542 Small Deletion Unknown Unknown TALEN
el543 Small Deletion Unknown Unknown TALEN
nju18 Indel Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • nju19 Insertion Unknown Unknown TALEN
    nju60 Indel Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • p162 Point Mutation Unknown Premature Stop ENU
    sa10371 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE
    Data: 27 figures from 10 publications
    Observed in:
    DISEASE ASSOCIATED WITH foxc1a HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Axenfeld-Rieger syndrome type 3 Axenfeld-Rieger syndrome, type 3 602482
    iridogoniodysgenesis syndrome Anterior segment dysgenesis 3, multiple subtypes 601631
    DISEASE ASSOCIATED WITH foxc1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process adrenal gland development (more)
    Cellular Component nucleus (more)
    Molecular Function chromatin binding (more)
    GO Terms (all 31)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA foxc1a-201 (1) 2175
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM foxc1a
    MARKER RELATIONSHIPS
    foxc1aContained in: [Fosmid] CH1073-434G19 (1) (order this)
    foxc1aEncodes: [cDNA] MGC:63879 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131728 (1) 2231bp
    Genomic GenBank:CU929125 (1) 28376bp
    Select Tool
    Polypeptide UniProtKB:Q9DE25 (1) 476aa
    Sequence Clusters UniGene:82483 (1)
    Sequence Information (all 18)
    ORTHOLOGY for foxc1a (Chr: 2)
    CITATIONS (65)