ZFIN ID: ZDB-GENE-980526-142

Mapping Details

Gene Name:	Janus kinase 1
Symbol:	jak1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	6	33,883,851 - 33,942,171	GRCz12tu
NCBI Map Viewer	6	33,883,851 - 33,942,171	GRCz12tu
Ensembl	6	31,368,071 - 31,429,161	GRCz11
NCBI Map Viewer	6	31,368,071 - 31,426,386	GRCz11
UCSC	6	-	GRCz11
Vega	6	31,381,157 - 31,442,247	GRCv10

Mapped Clones containing jak1
CH211-201N5	Chr: 6 Details
DKEY-202I2	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
t22598	6	31,407,085	GRCz11	DIRECT		Iwanami et al., 2011
	6		GRCz11	GENERAL_LOAD	load data [singleton]
	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	6		GRCz11	OTHER_MAPPING	linkagesDirectMem2
zf3761	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
6	105.9 cM	jak1	Mother of Pearl (MOP)	Postlethwait, John H.	Data
6	358.94 cR	jak1	Loeb/NIH/5000/4000 (LN54)	Johnson, Stephen L.	Data
6	3466.0 cR	jak1	Goodfellow T51 (T51)	Geisler, Robert	Data
6	84.8 cM	jak1	Heat Shock (HS)	Woods, Ian G.	Data
6	66.1 cM	jak1	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z25150	SSLP	6		Iwanami et al., 2011	Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HX157 ...
t22598	Feature	6		Iwanami et al., 2011	Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HX157 ...

Genomic Feature t22598 is an allele of jak1

Chr 6

Iwanami et al., 2011

Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HX157 (t22598) to jak1 on ...

Genomic Feature t22598 is an allele of jak1