ZFIN ID: ZDB-GENE-990714-26

ZFIN ID: ZDB-GENE-990714-26

Mapping Details

Gene Name:	lymphoid enhancer-binding factor 1
Symbol:	lef1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	53,128,721 - 53,218,083	GRCz12tu
NCBI Map Viewer	1	53,128,721 - 53,218,083	GRCz12tu
Ensembl	1	49,814,461 - 49,903,487	GRCz11
NCBI Map Viewer	1	49,814,524 - 49,903,487	GRCz11
UCSC	1	-	GRCz11
Vega	1	49,170,635 - 49,259,661	GRCv10

Mapped Clones containing lef1
DKEY-252L8	Chr: 1 Details
DKEY-5K4	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
nl2	1	49,885,453 - 49,885,454	GRCz11	DIRECT	McGraw et al., 2011
sa10902	1	53,194,949	GRCz12tu	DIRECT	Sealy et al., 2025
	1	49,880,363	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	49,236,537	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	50,387,446	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa18709	1	53,194,949	GRCz12tu	DIRECT	Sealy et al., 2025
	1	49,880,363	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	49,236,537	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	50,387,446	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa32764	1	53,200,052	GRCz12tu	DIRECT	Sealy et al., 2025
	1	49,885,466	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	49,241,640	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	50,392,549	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa39684	1	53,200,083	GRCz12tu	DIRECT	Sealy et al., 2025
	1	49,885,497	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	49,241,671	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	50,392,580	Zv9	DIRECT	Busch-Nentwich et al., 2013
u767	1	49,816,670	GRCz11	DIRECT	Valdivia et al., 2011
la013709Tg	1	50,321,722 - 50,321,732	Zv9	ZFIN_Zv9
la021271Tg	1	50,321,800 - 50,321,810	Zv9	ZFIN_Zv9
la021272Tg	1	50,353,201 - 50,353,211	Zv9	ZFIN_Zv9
la021273Tg	1	50,353,518 - 50,353,528	Zv9	ZFIN_Zv9
la021274Tg	1	50,378,124 - 50,378,134	Zv9	ZFIN_Zv9
la013709Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la021271Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la021272Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la021273Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la021274Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
nl2	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
u767	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
zd11	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	443.28 cR	lef1	Loeb/NIH/5000/4000 (LN54)	Johnson, Stephen L.	Data
1	6302.0 cR	lef1	Goodfellow T51 (T51)	Cretekos, Chris	Data
1	79.8 cM	lef1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
Df(Chr01:lef1,msxb)x8	Feature	1		Phillips et al., 2006
msx1b	GENE	1		Phillips et al., 2006

Genomic Feature nl2 is an allele of lef1

Chr 1

McGraw et al., 2011

McGraw et.al. (2011) mapped the lef1^nl2 mutation toa 460 Kb region on Chr.1.

Genomic Feature nl2 is an allele of lef1