Genomic Feature
icm15
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 24: 40027687 - 40027688 (GRCz11) (1) Details
- Nucleotide change
- -/ACATTATTATTTGAGA
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 16 bp inserted (1)
- Transcript Consequence
- None
- Protein Consequence
- Amino Acid Insertion: 5 AA added (1)
- Flanking Sequence
-
TTAAAAAGGTACACATTTGTACTTAAAGGGTCCATATTGGTACCACAAAAGTATATGTTAGTACTTAAATATTTCAATAGTGACTCTTTTGTACTTTTTAGGTACTAATATGTCCCCTTGAGGTATTAATAGGGACCTTTAAGGTACAAATTTGTACCTTTAGAAAAGGTACCACCCCAGTGACAGCTACTGTACCTTTATTCCTTTATTTCTGAGAGTGTCGTGTCGGGGATTATTGCAAGACTATTTCTACCTTTTTACATTTATTATAGGTGTTATACTTTTTTTCATAATTACATTGTAATCAATGTCAATGAAGTTATCAGACAGTATAGGGATCTATAAGGTGAAACTGTATGCATCTTCATGTTCAGGCACTGGTGTGAGCAGGTGGTCGAGGAGCAGGTGGAGAGACTGGTTTCTCCCCGTCAGCAGCAGGAGGTGGACTGCTCCTCTGTTTATCAGTTCAACACTCAGGGCTGGAGGCTGGATGTGGAGCGC
-/ACATTATTATTTGAGA ATGCGGCACGAACACGGAGGAGACGACGGCATCGCTCGATATTACCAGAGACAAGGCCCTAAAGCTGCCTGCTACATATTCAAGTGAGAGAAACATCACTGTTCTGATCCCTCCATCATATTTCTGACATAGGTTTTAGGTGTGTGAGTGTTATAAAAGTGCAGTTTTTACTTGTGAGAGTCATTTACTGTTGGTGTAACCCAGTAGCTCTCAACCAGGAGACTCAATCTAATATTTTTTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGACAAAAGAAGCAGTAAAATGAGTTTAAACAATTAATATTCTTGTCATAGTTTCATTTGTTTTCATAACAACTGTGTATTATTTGAGAACAAATATATATTATACAATTTTAAGTGTGATTTTTAGACATGTAAAACAACAATAAATTAATATATGTTTAAAAACGAATGGAGT - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
sspoicm15/icm15 | Homozygous | ♀+/- ♂+/- | 2 figures ![]() | ||
sspoicm15/icm15; icm07Tg | Complex | Fig. 3 from Orts-Del'Immagine et al., 2020 | Fig. 4 from Orts-Del'Immagine et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None
- Cantaut-Belarif, Y., Orts Del'Immagine, A., Penru, M., Pézeron, G., Wyart, C., Bardet, P.L. (2020) Adrenergic activation modulates the signal from the Reissner fiber to cerebrospinal fluid-contacting neurons during development. eLIFE. 9:
- Orts-Del'Immagine, A., Cantaut-Belarif, Y., Thouvenin, O., Roussel, J., Baskaran, A., Langui, D., Koëth, F., Bivas, P., Lejeune, F.X., Bardet, P.L., Wyart, C. (2020) Sensory Neurons Contacting the Cerebrospinal Fluid Require the Reissner Fiber to Detect Spinal Curvature In Vivo. Current biology : CB. 30(5):827-839.e4
- Thouvenin, O., Keiser, L., Cantaut-Belarif, Y., Carbo-Tano, M., Verweij, F., Jurisch-Yaksi, N., Bardet, P.L., van Niel, G., Gallaire, F., Wyart, C. (2020) Origin and role of the cerebrospinal fluid bidirectional flow in the central canal. eLIFE. 9:
- Cantaut-Belarif, Y., Sternberg, J.R., Thouvenin, O., Wyart, C., Bardet, P.L. (2018) The Reissner Fiber in the Cerebrospinal Fluid Controls Morphogenesis of the Body Axis. Current biology : CB. 28(15):2479-2486.e4
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