Genomic Feature

tsu5td

ID
ZDB-ALT-151230-3
Name
tsu5td
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Meng Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 2803218 - 2803222 (GRCz11) (1) Details
Nucleotide change
CCTCA/-
Variant Notes
Xing et al (2015): 5bp deletion in exon 1, leads to a shift of the open reading  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AAATATCTAGTGATCATCAACATCACATCGTGGGGTATATCAACACGAGTACAATAAGATTCGAATAAATTACACAAGTAGTGAATTGATTGTCTAGGATAGACTTTAAATGAATTGTGCAACCATTTTACATTCCTATCATCATAAAGCAACTCAAACACAGTTACACAATGATTATTGTTCATAATATCTGATGACAGAATGCTGACATAAACATAAACATCGAATACTACAATAAGAAGTAAAAAAAAAAGTACTTTAAATGTCTAACCTTGCTGGAAGACGAACTTATGCACCTCCTTGCCAAAATAGTCCTCATCCTCATCCTGCACAGGGACGATCTTCGTCTTCATTTCTTCGCTCAGTTCAACAGTGCTATTATATAACGAAAGCAAGGAATCCGGGATCTTCTGTCCGTCGTCGTCCGCTCCGGATTCAGGCTCTTTAGCCATGCGCAGTTTACTGAGGATCTGACCCCGAATAGCCTCAATCCGCTTCTT
CCTCA/- CCACCTCCAAATCCAGAGTCTTACAGGTGGACATGCTGCCCGTTCCCGTGACCAAACACAGGGCGGTCAGCACCAAGCAAACCAACCTCATAATGCTGAAATGTACGACCAAACTGTCCAGCGAGCAAGGAAAAAATGAAATGGAAAGGATCGAAAAGCGTCTGATTATAGAGGTGATGCTACCTGTTGAGGAGTCTGGAAAACACCTTGAATAATGGACTCAGCAGAACAGATGATGTCCGTCAATATGGGAATTTCCTAAGACCTCCATCCAGACAGAAACTAGCTTACAAGCAATTATTAGGCAAGCGCGTATATGAATAGACAGATATGGGATGAAGCCATACACAAATATGAATTCACCACACATGCATCACTGCTGGCAGTCGCACAAATGAATCATTATTCGATCTACACGGCCTGTTTTTCTTTCTATTTTAGGGTTTGGATAGTTGTGAAAACACAGAGACGCGACTGTAAGTGTGTTTACTTGCTAACTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations