Transcript

cast-212

ID

ZDB-TSCRIPT-091110-1736

Name

cast-212 Nomenclature History

Previous Names

cast-006
dkey-184p9.11-006
dkey-184p9.11-016
ottdart00000043573

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139814 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000139814.3|gene_biotype:protein_coding|ENSDARG00000058693.6 transcript_biotype:protein_coding cdna chromosome:GRCz11:21:11604135:11655012:-1
GAGCGTCACGTGCAGATAGTTATCAAAAGAATGGAGACAC
TTCATTTCAAAAACAAGAATACGCTCCACAGACATCAAGG
TTCATGTCTCAGCAGGTCACACCCACCACAACATCTCAGG
TCTCCACAGTGAAACCTGCACAATATGAGGTGCAGGTTGA
AGTGGGTCCTTCAGCAGCAAAAGCTGACGATCCGTTTGAT
GCCCTGTCTGGCACATTACCATCATCACAACCTTTGGCTC
CTAAAGTCCACTACACTGGACCTGAGATCAAAGAGCCCAA
ACTGAAATCAGAGAAAGGTGTTTTGTGTGGTGAGCGAGAT
GACACGCTGCCGCCCGGATACAGAAAGGAAGACCTGGAAA
AGAAGCATGGAGCTGGAGTTCCAGCTGGAGTTCCGGAGAA
GCCTAAAGAAGTTCCCAAGCCCATAAGCACAGATGATGCA
CTGGAATCTCTCTCCTCTACGTTTGTGTCTCCAGCTCAAG
CTGCTCCAAAGAAGACAGACGTGAAAACTGAAACAATAGG
AGCAGTGGATGTTAAATCGGCAGGCACCACTAACTTTGCT
CCCCCTCCACCATCTCAGCAGAAACAACCGGCGTCGTCTC
AAGCTGCTGCTGTAACCAAATCACCTGCTCCACCGGCAGA
CAAGAAAGCTAAAATGGAGACTCATGCACAACCAGCCAAA
GCAAAGACAGAGTCGGACAGCTCCATATCGCTGGACGCTC
TCGATGCTTTGAGCGACACACTGGGGGCTTCTAAACCACC
CC

OTTDART00000043573 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043573|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034545 DKEY-184P9.11-006 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 762 bp
GAGCGTCACGTGCAGATAGTTATCAAAAGAATGGAGACAC
TTCATTTCAAAAACAAGAATACGCTCCACAGACATCAAGG
TTCATGTCTCAGCAGGTCACACCCACCACAACATCTCAGG
TCTCCACAGTGAAACCTGCACAATATGAGGTGCAGGTTGA
AGTGGGTCCTTCAGCAGCAAAAGCTGACGATCCGTTTGAT
GCCCTGTCTGGCACATTACCATCATCACAACCTTTGGCTC
CTAAAGTCCACTACACTGGACCTGAGATCAAAGAGCCCAA
ACTGAAATCAGAGAAAGGTGTTTTGTGTGGTGAGCGAGAT
GACACGCTGCCGCCCGGATACAGAAAGGAAGACCTGGAAA
AGAAGCATGGAGCTGGAGTTCCAGCTGGAGTTCCGGAGAA
GCCTAAAGAAGTTCCCAAGCCCATAAGCACAGATGATGCA
CTGGAATCTCTCTCCTCTACGTTTGTGTCTCCAGCTCAAG
CTGCTCCAAAGAAGACAGACGTGAAAACTGAAACAATAGG
AGCAGTGGATGTTAAATCGGCAGGCACCACTAACTTTGCT
CCCCCTCCACCATCTCAGCAGAAACAACCGGCGTCGTCTC
AAGCTGCTGCTGTAACCAAATCACCTGCTCCACCGGCAGA
CAAGAAAGCTAAAATGGAGACTCATGCACAACCAGCCAAA
GCAAAGACAGAGTCGGACAGCTCCATATCGCTGGACGCTC
TCGATGCTTTGAGCGACACACTGGGGGCTTCTAAACCACC
CC

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2,527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Ensembl	710 nt	Select Tool ZFIN BLAST
mRNA	cast-203 (1) Ensembl	Ensembl	3,766 nt	Select Tool ZFIN BLAST
mRNA	cast-204 (1) Ensembl	Ensembl	1,062 nt	Select Tool ZFIN BLAST
mRNA	cast-205 (1) Ensembl	Ensembl	895 nt	Select Tool ZFIN BLAST
mRNA	cast-207 (1) Ensembl	Ensembl	729 nt	Select Tool ZFIN BLAST
mRNA	cast-208 (1) Ensembl	Ensembl	645 nt	Select Tool ZFIN BLAST
mRNA	cast-209 (1) Ensembl	Ensembl	977 nt	Select Tool ZFIN BLAST
mRNA	cast-211 (1) Ensembl	Ensembl	462 nt	Select Tool ZFIN BLAST
mRNA	cast-212	Ensembl	762 nt
mRNA	cast-213 (1) Ensembl	Ensembl	843 nt	Select Tool ZFIN BLAST
mRNA	cast-214 (1) Ensembl	Ensembl	398 nt	Select Tool ZFIN BLAST
mRNA	cast-215 (1) Ensembl	Ensembl	576 nt	Select Tool ZFIN BLAST
mRNA	cast-216 (1) Ensembl	Ensembl	747 nt	Select Tool ZFIN BLAST
mRNA	cast-217 (1) Ensembl	Ensembl	2,515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2,443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2,734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Ensembl	328 nt	Select Tool ZFIN BLAST
ncRNA	cast-015 (1) Ensembl	Ensembl	467 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations