Transcript

cast-203

ID

ZDB-TSCRIPT-091110-1011

Name

cast-203

Previous Names

cast-001
ch211-260m19.8-002
dkey-184p9.11-001
ottdart00000043569

Transcript Type

mRNA

Annotation Status

Annotation Method

Havana

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000043569 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043569|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034541 DKEY-184P9.11-001 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 3766 bp
TCAGTTGAATGAAAGAAGCTGGCGAGCTCGAGTCGAGGGG
GACTTAAGCAAACTTTCTATCCTTCACGCACCATGGCGTA
CGCAATGTATTGGGCGCGCAACAATGGAGACACTTCATTT
CAAAAACAAGAATACGCTCCACAGACATCAAGGTTCATGT
CTCAGCAGGTCACACCCACCACAACATCTCAGGTCTCCAC
AGTGAAACCTGCACAATATGAGAAAGGAGCTACACAATCG
TCTACAGCAGCTGCGACTGTCAAATCCGGCGCTGGAGATC
CTGCAACCACCCAGAAAGGATCTTCTCAAGTCAAACCTCA
GGTCACAGATTCTAAATCAACACCTGCATCTTCTGCTAAA
GTCTCAGCTGTGAGCTCTGGGACTGGAGTTGCTGGTACAA
CCGGTGGAGCAGGAGTGAAACCAGCAGATCCTGCAAAAGA
TACGCCTCAGAGCACCACCATTCCTTCAACCAAACTGGGA
CCTGCTAAGGTGGATCCGGCTGCTGGGAAGCCCTCTGGCT
CAGCTGGTGCCCAAAAACAGACAAGTGCTCAAAAGGTGCA
GGTTGAAGTGGGTCCTTCAGCAGCAAAAGTCAGTGCAGAT
GCTGACGATCCGTTTGATGCCCTGTCTGGCACATTACCAT
CATCACAACCTTTGGCTCCTAAAGTCCACTACACTGGACC
TGAGATCAAAGAGCCCAAACTGAAATCAGAGAAAGGTGTT
TTGTGTGGTGAGCGAGATGACACGCTGCCGCCCGGATACA
GAAAGGAAGACCTGGAAAAGAAGCATGGAGCTGGAGTTCC
AGCTGGAGTTCCGGAGAAGCCTAAAGAAGTTCCCAAGCCC
ATAAGCACAGATGATGCACTGGAATCTCTCTCCTCTACGT
TTGTGTCTCCAGCTCAAGCTGCTCCAAAGAAGACAGACGT
GAAAACTGAAACAATAGGAGCAGTGGATGTTAAATCGGCA
GGCACCACTAACTTTGCTCCCCCTCCACCATCTCAGCAGA
AACAACCGGCGTCGTCTCAAGCTGCTGCTGTAACCAAATC
ACCTGCTCCACCGGCAGACAAGAAAGCTAAAATGGAGACT
CATGCACAACCAGCCAAAGCAAAGACAGAGTCGGACAGCT
CCATATCGCTGGACGCTCTCGATGCTTTGAGCGACACACT
GGGGGCTTCTAAACCACCCCAAAAATTACCAGAACTCAAA
CCTGGACAGATAGTTGATGAGAAGAAACAGACCTCAGAGA
AAGGTGTTCGTGTTGGAGAAAGAGACGACACACTTCCACC
ACAATACAGATTCAAAGAGGAAGATCTCAAGAAATATCCT
CCACCTGCGAAAGAGCCTTCACTGAACACAGATGATGCGA
TGGACATACTTTCAGGAGATTTCACGACCCCTGCATCGGC
ACCTGTTGTCAAAGCTCCTGTTCCTCCTGCACAGGACACA
AAGAAGCATGCTGCAGTGCCTGAGAAGACCAAAGATATTC
CCAAGACTAAAGCTGATGCTCTGTCAAGTGATTTCGTGGC
TCCGGCACATTCTGCTCCTAAGGTTTCTTCAGCTGCTCCT
AAAACCATCCCTCCAGGCCCACCACAAACCCCAGATGAGG
ATCCTTTCAGTGCTTTGGGCGACACTCTTTCTGCCCCAGA
ACCACCAAAAAAACAACCTGACCTGAAACCTAAGGACATC
GTACATGAGAAGGATGTGACGTCAAAGAAAGGAGTTCGTG
TTGGAGAAAGAGACGACACACTCCCACCAGAATACAGATT
CAAAGAGGAAGATCTCAAGAAATATCCTCCTCCTCAGAAA
GATCCTTCCTTAGATGCTAATGAAGCTCTGGATATTCTGT
CTGGGGATTTTACAACTCCTTCCGCACCATCGGCTGTTTC
CCCTGCCTCTAAATCCTCTGCCAAGTCTTCAGATTCAGCT
TTAGATGCTCTTGCTGGTGATTTCGTCGCTTCTTCTTCTG
CGTCTTCAGTTCATTCTGCCGTCTCTGGCCCCCCACGCTC
CGACAGACTGTTGTCAGACGGAACCTCATCAGCTCTAGAT
GCCCTGTCAGAAACTCTGGGAGACATTAAAGCAGCCCCTG
AACCCGCCCCTGTCCTACCTAAAACTGTCGTTAAGGAGAA
GACGGTCATAGAAGAGAGAGTGAGTAAACCGGGTGAGAGA
GACGACTCCCTTCCACCAGATCAGCGGTTCACTGCGGAGG
ATCGCAAGGCATTTGAAGAAGCAAAGAAGAAAGACGCCAA
ACCAAAACAGCCATCAATGGACGATTCAGCGGCTCTGGAC
ATGTTGTCTAGTGATTTTTCAGATGTACCGACTGTAAAGC
CCACTGTATCTGATGGCAAAAGCTTCACCCCTGAACCAAC
ACCACCAACCTTTAAGGCAACCGGTCCGGTTTTAGACAAA
CTGGCAGACAACGTGCTTTCCAACCTGACTGACCCCAAAG
CCAAAGACAGCAAAGCAAAGAAACAGGCAGTGGAAGACTC
TTCAGCCACAGATCTGCTGTCCAGTAAACCGAGCTCAGAT
GTGGTGCCTTCAGCTTCCACAAAGGCTGGAAAAAGATAAA
TTACAAATTTATGATGTGTCATCCCTAACACAAGAAACCA
TTAAAGGGAGCTGCTCGGACAAGAAAAATATTTTATGATG
GACATGGAATGAAACAAAAATGAAAAAATTATATATATAT
ATATAGAACTGCACAGAGACACTTACACGTTCTTAGAGCC
CCCTTCTCTTTTCTTCTAAAGCAAAGCAAAAATCATAGCG
ATCATTAATCTCTTCATGGCTGACAGAACATGTATATACA
GAATGGTGTTTACATCGAGTGCATGTATGGTTCTCTGGTC
ATTATTCAATGGTAAAAAAAAATAAACTATGCCATGTGTG
TGTGTATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATA
TATATATATATATATATATATATATATATATTAATCATCT
ATACTGGGGGTCTCTAGCATCTTCCTGTGTGAAGATCTGT
GGAGACCCTTGTGTACAGAGATGGTGTATACTGTAGGTTA
TAAATTTGTTTACAGTCAGTACAGAAATGGCAATGGATTA
CCGTGATTATGATGCTTTTTGAATGCTGTTGTATGTCTGG
TTAATGACACTAGTCAAAAAAAAAGGTTTGCTTGGGAGGT
GTTTCTTTTATTTTTCGTTTCCTGAAGTGCACTTACAAGG
ATGCTTTCGAAAAAACAAATGTAATAACTTTGCAAACACT
AAACGTGCCTGTCGTCATCATAAGTGTTAGAGGATCATTT
GGAAAACTTTTTATTTTAGTTCCACATGAATTTGGAGATT
GTTGTAGGTTACAAATCAATTTTAAATGTATTTTACAGTA
TAGGTTGAAAGGTGTTGCATTAGAAGTGGTGGGGAAAACT
GAATCTTTAGCTTTTTTTTTTTCAATCGGTTGTGTTGGTT
TTAAGGGTGGCCACAACATTGCCGTTATGGACTTTAAAGT
GTTCATATTACATCCAGAGCTGATAGAAACCAAAGTATGA
CCTTTGAACCCAGCAGTTTCTTCCATAGGTTTTGCTGTTC
CTTAATGTTTAACAGATGCAGACAGGTTTTCCTGGAGCAT
TTAGAGATGTTGTGTGCTATTAATTGTAACAGGACGGTAT
TTTTAAGAAGGGATTTTTATTCTTTAAAACAACAAAACAA
ATTTGAACTAATGAAAAATATAAGACCTTTTTGTTTTGGA
ATATTCAGTTCTTTAAATCTTTATGCAAATAAAGATGTAT
TGATGA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-203	Havana	3766 nt
mRNA	cast-204 (1) Ensembl	Havana	1062 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-205 (1) Ensembl	Havana	895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-207 (1) Ensembl	Havana	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-208 (1) Ensembl	Havana	645 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-209 (1) Ensembl	Havana	977 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-211 (1) Ensembl	Havana	462 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-212 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-213 (1) Ensembl	Havana	843 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-214 (1) Ensembl	Havana	398 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-215 (1) Ensembl	Havana	576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-216 (1) Ensembl	Havana	747 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-014 (1) Ensembl	Havana	328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-015 (1) Ensembl	Havana	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations