Transcript

cast-208

ID

ZDB-TSCRIPT-091110-1015

Name

cast-208

Previous Names

cast-013
dkey-184p9.11-013
dkey-222k23.3-003
ottdart00000043581
si:dkey-184p9.11-013

Transcript Type

mRNA

Annotation Status

Annotation Method

Havana

Associated With Genes

cast (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000043581 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043581|OTTDARG00000031291|ZDB-GENE-050810-2 cast|OTTDARP00000034553 DKEY-184P9.11-013 LG_none BX005379.9,BX927307.12,BX511081.8 Danio rerio protein_coding KNOWN, 645 bp
GTATATGCTTGTGTATGTGCATGGGGGATATATTTTGATT
ATTTCAGACTTGAATATTTCAGGCTCTCTCTTTAAGATTG
GATTACAGCTGAAAGTGAAACAGGACGCTCTTGGTGTTGT
TACAGATGTCTCAGCAGGTCACACCCACCACAACATCTCA
GGTCTCCACAGTGAAACCTGCACAATATGAGAAAGGAGCT
ACACAATCGTCTACAGCAGCTGCGACTGTCAAATCCGGCG
CTGGAGATCCTGCAACCACCCAGAAAGGATCTTCTCAAGT
CAAACCTCAGGTGCAGGTTGAAGTGGGTCCTTCAGCAGCA
AAAGTCAGTGCAGATGCTGACGATCCGTTTGATGCCCTGT
CTGGCACATTACCATCATCACAACCTTTGGCTCCTAAAGT
CCACTACACTGGACCTGAGATCAAAGAGCCCAAACTGAAA
TCAGAGAAAGGTGTTTTGTGTGGTGAGCGAGATGACACGC
TGCCGCCCGGATACAGAAAGGAAGACCTGGAAAAGAAGCA
TGGAGCTGGAGTTCCAGCTGGAGTTCCGGAGAAGCCTAAA
GAAGTTCCCAAGCCCATAAGCACAGATGATGCACTGGAAT
CTCTCTCCTCTACGTTTGTGTCTCCAGCTCAAGCTGCTCC
AAAGA

Related Transcripts

Transcripts related to cast

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	cast-201 (1) Ensembl	Ensembl	2527 nt	Select Tool ZFIN BLAST
mRNA	cast-202 (1) Ensembl	Havana	710 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-203 (1) Ensembl	Havana	3766 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-204 (1) Ensembl	Havana	1062 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-205 (1) Ensembl	Havana	895 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-207 (1) Ensembl	Havana	729 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-208	Havana	645 nt
mRNA	cast-209 (1) Ensembl	Havana	977 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-211 (1) Ensembl	Havana	462 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-212 (1) Ensembl	Havana	762 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-213 (1) Ensembl	Havana	843 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-214 (1) Ensembl	Havana	398 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-215 (1) Ensembl	Havana	576 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-216 (1) Ensembl	Havana	747 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cast-217 (1) Ensembl	Ensembl	2515 nt	Select Tool ZFIN BLAST
mRNA	cast-218 (1) Ensembl	Ensembl	2443 nt	Select Tool ZFIN BLAST
mRNA	cast-219 (1) Ensembl	Ensembl	2734 nt	Select Tool ZFIN BLAST
ncRNA	cast-014 (1) Ensembl	Havana	328 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	cast-015 (1) Ensembl	Havana	467 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations