Transcript

eif4e1c-202

ID

ZDB-TSCRIPT-090929-11804

Name

eif4e1c-202 Nomenclature History

Previous Names

eif4e1c-005
zgc:110154-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

eif4e1c (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000108764 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000108764.4|gene_biotype:protein_coding|ENSDARG00000012274.12 transcript_biotype:nonsense_mediated_decay gene_symbol:eif4e1c cdna chromosome:GRCz11:13:18311512:18324465:1
ACAGGCAAGATGGCGACTTCGGAGCCGCGAGGAACTGAAA
CTGAAGAAGTCCGCTCTGATAGTCCTACGGCTGTTGTGAC
GACAAGTCCTGAACAGTACATCAAACACCCTTTGCAAAAC
AGATGGGCCCTCTGGTATTTCAAAAATGACAAGAGCAAAA
GTTGGACAGAAAACCTGCGTCTCATCTCCAAGTTTGACAC
AGTGGAAGATTTCTGGGCGATGGTATTAAACCCATGTGGG
AGGATGATAGGAATAAACTGGGTGGACGGTGGTTAATGAC
CCTCAGCAAACAGCAACGGCACAACGACCTTGACCGCTAC
TGGATGGAGACCCTGTTGTGTTTAATCGGAGAGTCCTTTG
ACGAGGCCAGTGAAGATGTGTGTGGTGCTGTTGTCAATGT
CAGGCCAAAAGGGGATAAAATAGCCATTTGGACAGGCAAC
TGCCAAAACAGGGACGCAATCATGACGATAGGGCAACAAT
ACAAAGAGCGTTTGAGTCTCCCAAGCAAAACCCTCATCGG
ATACCAGTCACATGACGACACCTCTAGCAAAAGCGGCTCT
ACAACAAAGAATATGTACTCTGTTTGAAGAAAACTAATCT
CAACTCATTGTAGGTTTATACAATTTCAAATTTGCATCAC
ATTAATACTTTTCAGTTGTCAACTACTGTAGTGTCCTTCC
TTTTTAAGAAAAGAAAATAAAAAAAAAGTCAAATGTAAAT
GTAGTGCTCTCCAGCCTGAATCGATCAGCAGCGTCACCGT
GTGGATCAGGCACCGTCTGCTTGTTTTAGACCTGAGAGAG
GAGCGCCAGTTGAGCTAGACGTTACTGATATCATTTTAGC
CATTCGGGAGAGTTTAAAAGGACTAATCCAGACTTACCTA
GATGAAGAGGTTCTAAAGCTTAGACACGAGAGACCAACCG
CTCTTCGCTTTAACCTTTCACTTTCTCTCACGCATCATCA
GTTGTTTCTCACAGTCAGACGAACAAATAAACCCACCACT
TTATCCACACGGACGTTTTAAGGGCCCAAACTGTTTTAAC
ATGCTTTGGTTGGAGGTGTTTGGCATGAGACGAGTGTGCA
GAGGCACCTGCAGACTGACTATCTTAAAGGTTTGTAAAGG
ATTACTTTCGGTCGCGCTCCATGTTTTGAATTTGGAGGAG
TGGTCGTTTATTGTTTCAGCTATGCTGGAATTGTGGCATC
TTGCTTGTAGACCTATTATCTAACAGTTGTGTTTCTCCTT
CATCCCCTTCATCTATTTATGATGTATGCATTGCAGTTCA
ACTATGTATAGTGAGAGGAAGACCATGGAAATCAAGCTTT
CTTTCAGTTCTTTTTTTTTTTTTGAGGTTCTTAGCGATGT
TGGACTACTGCTTGCTGTTTCTCTTTTTTGTTTGTTAGTT
TGAGCTTCTTTTTTTTTTTTACAGTGTATTCAGTGAATGC
CTGGACATACATGCTTATTAGGTTTGCTTTCACCTTCCCC
TCATTGATACTGTAGACATTTTCTAGTTTGCCCCCACTCT
TTGGATCATTGAAAGAAGAGAGGATTCATTCATTGTGAAT
TTATTTTGCTCATAATGTATCTTTATTATCTGTAATTCCA
GGATGTATATTACCTTCTTTCAAAGTAAAGGTTATGTGCT
TTGCA

OTTDART00000029409 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000029409|OTTDARG00000022741|ZDB-GENE-050417-398 eif4e1c|OTTDARP00000040051 DKEY-228D14.3-005 LG_ BX927098.24 Danio rerio protein_coding KNOWN, 1645 bp
ACAGGCAAGATGGCGACTTCGGAGCCGCGAGGAACTGAAA
CTGAAGAAGTCCGCTCTGATAGTCCTACGGCTGTTGTGAC
GACAAGTCCTGAACAGTACATCAAACACCCTTTGCAAAAC
AGATGGGCCCTCTGGTATTTCAAAAATGACAAGAGCAAAA
GTTGGACAGAAAACCTGCGTCTCATCTCCAAGTTTGACAC
AGTGGAAGATTTCTGGGCGATGGTATTAAACCCATGTGGG
AGGATGATAGGAATAAACTGGGTGGACGGTGGTTAATGAC
CCTCAGCAAACAGCAACGGCACAACGACCTTGACCGCTAC
TGGATGGAGACCCTGTTGTGTTTAATCGGAGAGTCCTTTG
ACGAGGCCAGTGAAGATGTGTGTGGTGCTGTTGTCAATGT
CAGGCCAAAAGGGGATAAAATAGCCATTTGGACAGGCAAC
TGCCAAAACAGGGACGCAATCATGACGATAGGGCAACAAT
ACAAAGAGCGTTTGAGTCTCCCAAGCAAAACCCTCATCGG
ATACCAGTCACATGACGACACCTCTAGCAAAAGCGGCTCT
ACAACAAAGAATATGTACTCTGTTTGAAGAAAACTAATCT
CAACTCATTGTAGGTTTATACAATTTCAAATTTGCATCAC
ATTAATACTTTTCAGTTGTCAACTACTGTAGTGTCCTTCC
TTTTTAAGAAAAGAAAATAAAAAAAAAGTCAAATGTAAAT
GTAGTGCTCTCCAGCCTGAATCGATCAGCAGCGTCACCGT
GTGGATCAGGCACCGTCTGCTTGTTTTAGACCTGAGAGAG
GAGCGCCAGTTGAGCTAGACGTTACTGATATCATTTTAGC
CATTCGGGAGAGTTTAAAAGGACTAATCCAGACTTACCTA
GATGAAGAGGTTCTAAAGCTTAGACACGAGAGACCAACCG
CTCTTCGCTTTAACCTTTCACTTTCTCTCACGCATCATCA
GTTGTTTCTCACAGTCAGACGAACAAATAAACCCACCACT
TTATCCACACGGACGTTTTAAGGGCCCAAACTGTTTTAAC
ATGCTTTGGTTGGAGGTGTTTGGCATGAGACGAGTGTGCA
GAGGCACCTGCAGACTGACTATCTTAAAGGTTTGTAAAGG
ATTACTTTCGGTCGCGCTCCATGTTTTGAATTTGGAGGAG
TGGTCGTTTATTGTTTCAGCTATGCTGGAATTGTGGCATC
TTGCTTGTAGACCTATTATCTAACAGTTGTGTTTCTCCTT
CATCCCCTTCATCTATTTATGATGTATGCATTGCAGTTCA
ACTATGTATAGTGAGAGGAAGACCATGGAAATCAAGCTTT
CTTTCAGTTCTTTTTTTTTTTTTGAGGTTCTTAGCGATGT
TGGACTACTGCTTGCTGTTTCTCTTTTTTGTTTGTTAGTT
TGAGCTTCTTTTTTTTTTTTACAGTGTATTCAGTGAATGC
CTGGACATACATGCTTATTAGGTTTGCTTTCACCTTCCCC
TCATTGATACTGTAGACATTTTCTAGTTTGCCCCCACTCT
TTGGATCATTGAAAGAAGAGAGGATTCATTCATTGTGAAT
TTATTTTGCTCATAATGTATCTTTATTATCTGTAATTCCA
GGATGTATATTACCTTCTTTCAAAGTAAAGGTTATGTGCT
TTGCA

Related Transcripts

Transcripts related to eif4e1c

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	eif4e1c-202	Ensembl	1,645 nt
mRNA	eif4e1c-201 (1) Ensembl	Ensembl	1,815 nt	Select Tool ZFIN BLAST
mRNA	eif4e1c-203 (1) Ensembl	Ensembl	1,005 nt	Select Tool ZFIN BLAST
mRNA	eif4e1c-206 (1) Ensembl	Ensembl	356 nt	Select Tool ZFIN BLAST
ncRNA	eif4e1c-002 (1) Ensembl	Ensembl	868 nt	Select Tool ZFIN BLAST
ncRNA	eif4e1c-004 (1) Ensembl	Ensembl	196 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations