Gene

irx3a

ID
ZDB-GENE-991119-5
Name
iroquois homeobox 3a
Symbol
irx3a Nomenclature History
Previous Names
  • iro3 (1)
  • irx3
  • ziro3 (1)
  • hm:zehn0543
  • id:ibd3380 (1)
  • iro3-s1 (1)
  • iro3-s2 (1)
  • wu:fk88a03 (1)
  • zehn0543
  • zgc:109805
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have sequence-specific DNA binding activity. Involved in endocrine pancreas development and gastrulation. Predicted to localize to nucleus. Is expressed in several structures, including germ ring; hindbrain neural keel; nervous system; neural rod; and pancreatic system. Orthologous to human IRX3 (iroquois homeobox 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
42 figures from 25 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Ragvin et al., 2010
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With irx3a Human Ortholog
No data available
Associated With irx3a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR003893 Iroquois-class homeodomain protein
Domain IPR008422 KN homeodomain
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeodomain Iroquois-class homeodomain protein KN homeodomain
UniProtKB:Q90Z68 454
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA irx3a-201 (1) Ensembl 1,848 nt
mRNA irx3a-203 (1) Ensembl 4,893 nt
ncRNA irx3a-002 (1) Ensembl 2,628 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations