ZFIN ID: ZDB-GENE-060518-2
Gene Name: popeye domain containing 2
Gene Symbol: popdc2    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have cAMP binding activity. Involved in cardiac conduction; heart looping; and striated muscle cell differentiation. Predicted to localize to the sarcolemma. Is expressed in heart rudiment; musculature system; pectoral fin bud; pericardial region; and somite. Orthologous to human POPDC2 (popeye domain containing 2).
Genome Resources: Alliance (1),  Gene:793666 (1), 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-popdc2 N/A 2
MO2-popdc2 N/A 2
DISEASE ASSOCIATED WITH popdc2 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH popdc2 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cardiac conduction (more)
Cellular Component integral component of membrane (more)
Molecular Function cAMP binding (more)
GO Terms (all 12)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Family IPR006916 Popeye protein
Homologous_superfamily IPR018490 Cyclic nucleotide-binding-like
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA popdc2-201 (1)    Ensembl 2645
popdc2-202 (1)    Ensembl 2476
Browsers: NCBI
INTERACTIONS AND PATHWAYS
ANTIBODIES
Name Type Isotype Host Organism Assay Source Publications
Ab1-popdc2 polyclonal Rabbit IHC Sigma-Aldrich
1
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM popdc2 No data available
MARKER RELATIONSHIPS
popdc2 Contained in: [BAC] RP71-68N21 (1)
popdc2 Encodes: [EST] fi26h09
[cDNA] MGC:158519 (1), MGC:174632 (1), MGC:191375 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001020800 (1) 2661 nt
Genomic GenBank:CT027983 (1) 185833 nt
Select Tool
Polypeptide UniProtKB:A0A2R8RP27 (1) 370 aa
Sequence Information (all 28)
ORTHOLOGY for popdc2 ( Chr: 9 )
CITATIONS (19)