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ZIRC
ZFIN ID: ZDB-GENE-040912-165
Gene Name: interferon regulatory factor 9
Gene Symbol: irf9
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: isgf3g (1), zgc:92097

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in immune system process. Predicted to localize to the nucleus. Is expressed in brain  ...
GENE EXPRESSION
All Expression Data: 8 figures from 7 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:92097]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa4457 Point Mutation Unknown Premature Stop ENU
sa6239 Point Mutation Unknown Premature Stop ENU
sa17117 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH irf9 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Immunodeficiency 65, susceptibility to viral infections 618648
    DISEASE ASSOCIATED WITH irf9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 6)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA irf9-201 (1) 1767
    irf9-202 (1) 538
    aberrant processed transcript irf9-203 (1) 614
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM irf9 No data available
    MARKER RELATIONSHIPS
    irf9 Contained in: [BAC] CH211-198P7 (1) (order this)
    irf9 Encodes: [cDNA] MGC:92097 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205710 (1) 1772 bp
    Genomic GenBank:BX571950 (1) 196442 bp
    Select Tool
    Polypeptide UniProtKB:F1Q573 (1) 428 aa
    Sequence Clusters UniGene:133138 (1)
    Sequence Information (all 21)
    ORTHOLOGY for irf9 ( Chr: 12 )
    CITATIONS (41)