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ZIRC
ZFIN ID: ZDB-GENE-040426-811
Gene Name: ribosomal protein SA
Gene Symbol: rpsa
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: laminin receptor 1 (ribosomal protein SA), lamr1 (1), zgc:55831, zgc:77824

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation and ribosomal small subunit assembly. Predicted to localize to the cytosolic small ribosomal  ...
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55831]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1479Tg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH rpsa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Asplenia, isolated congenital 271400
    DISEASE ASSOCIATED WITH rpsa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component cytoplasm (more)
    Molecular Function laminin binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpsa-201 (1) 410
    rpsa-202 (1) 2351
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM rpsa No data available
    MARKER RELATIONSHIPS
    rpsa Contained in: [BAC] CH211-146L13 (1) (order this), CH211-215G15 (1) (order this)
    rpsa Encodes: [cDNA] MGC:55831 (1) (order this), MGC:77824 (order this), MGC:191259 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201052 (1) 1126 bp
    Genomic GenBank:CR925711 (1) 200688 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B2GNT1 (1) 308 aa
    Sequence Clusters UniGene:75127 (1)
    Sequence Information (all 22)
    ORTHOLOGY for rpsa ( Chr: 6 )
    CITATIONS (40)