ZFIN ID: ZDB-GENE-040426-811
Gene Name: ribosomal protein SA
Gene Symbol: rpsa
Sequence Ontology ID : SO:0000704

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Previous Names: laminin receptor 1 (ribosomal protein SA), lamr1 (1), zgc:55831, zgc:77824

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:55831]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi1479Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE
    Data: 3 figures from 3 publications
    Observed in:
    DISEASE ASSOCIATED WITH rpsa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Asplenia, isolated congenital 271400
    DISEASE ASSOCIATED WITH rpsa VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process translation (more)
    Cellular Component cytoplasm (more)
    Molecular Function laminin binding (more)
    GO Terms (all 16)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001865 (1)
  • InterPro:IPR005707 (1)
  • InterPro:IPR018130 (1)
  • InterPro:IPR023591 (1)
  • InterPro:IPR027498 (1)
  • InterPro:IPR027504 (1)
  • InterPro:IPR032281 (1)
  • PROSITE:PS00962 (1)
  • PROSITE:PS00963 (1)
  • Pfam:PF00318 (1)
  • Pfam:PF16122 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rpsa-001 (1) 2351
    rpsa-002 (1) 410
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rpsa No data available
    MARKER RELATIONSHIPS
    rpsaContained in: [BAC] CH211-146L13 (1) (order this), CH211-215G15 (1) (order this)
    rpsaEncodes: [cDNA] MGC:55831 (1) (order this), MGC:77824 (order this), MGC:191259 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_201052 (1) 1126bp
    Genomic GenBank:CR925711 (1) 200688bp Blast at MegaBLAST
    Polypeptide UniProtKB:B2GNT1 (1) 308aa
    Sequence Clusters UniGene:75127 (1)
    Sequence Information (all 22)
    OTHER rpsa GENE PAGES
  • Alliance (1)
  • Gene:394027 (1)
  • VEGA:OTTDARG00000019726 (1)
  • Ensembl(GRCz11):ENSDARG00000019181 (2)
  • ORTHOLOGY for rpsa (Chr: 6)
    CITATIONS (37)