ZFIN is now using GRCz12tu for Genomic Data
Gene
ythdf1
- ID
- ZDB-GENE-040426-2786
- Name
- YTH N6-methyladenosine RNA binding protein F1
- Symbol
- ythdf1 Nomenclature History
- Previous Names
-
- fb49c02
- wu:fb49c02
- wu:fi19h06
- wu:fj87f09
- wu:fp06c11
- zgc:55657
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Enables mRNA 3'-UTR binding activity. Predicted to be involved in mRNA destabilization. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in colorectal cancer. Orthologous to human YTHDF1 (YTH N6-methyladenosine RNA binding protein F1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55657 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | YTH domain | YTH domain containing protein |
|---|---|---|---|---|
| UniProtKB:Q802Z0 | InterPro | 614 | ||
| UniProtKB:A0A8M2BEG4 | InterPro | 611 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ythdf1-201
(1)
|
Ensembl | 4,168 nt | ||
| mRNA |
ythdf1-203
(1)
|
Ensembl | 2,323 nt | ||
| ncRNA |
ythdf1-002
(1)
|
Ensembl | 557 nt |
Interactions and Pathways
No data available
Plasmids
- Genome Browsers