Gene

hnrnpk

ID

ZDB-GENE-040426-1926

Name

heterogeneous nuclear ribonucleoprotein K

Symbol

hnrnpk Nomenclature History

Previous Names

hnrpk (1)
wu:fb37h02
wu:fi34c04
zgc:66162

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to have DNA binding activity and RNA binding activity. Predicted to be involved in RNA processing and regulation of transcription by RNA polymerase II. Predicted to localize to viral nucleocapsid. Is expressed in central nervous system; gut; otic vesicle; pectoral fin; and ventral mesoderm. Orthologous to human HNRNPK (heterogeneous nuclear ribonucleoprotein K).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

13 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:66162 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hnrnpk Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Au-Kline syndrome	616580

Associated With hnrnpk Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR004087	K Homology domain
Domain	IPR004088	K Homology domain, type 1
Domain	IPR012987	ROK, N-terminal
Homologous_superfamily	IPR036612	K Homology domain, type 1 superfamily

Domain Details Per Protein

Protein	Length	K Homology domain	K Homology domain, type 1	K Homology domain, type 1 superfamily	ROK, N-terminal
UniProtKB:F1QWB4 InterPro	429
UniProtKB:A0A2R8Q139 InterPro	417

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hnrnpk-201 (1) Ensembl	Ensembl	2,227 nt	Select Tool ZFIN BLAST
mRNA	hnrnpk-205 (1) Ensembl	Ensembl	551 nt	Select Tool
mRNA	hnrnpk-206 (1) Ensembl	Ensembl	1,186 nt	Select Tool
mRNA	hnrnpk-209 (1) Ensembl	Ensembl	2,195 nt	Select Tool
mRNA	hnrnpk-210 (1) Ensembl	Ensembl	3,023 nt	Select Tool ZFIN BLAST
mRNA	hnrnpk-211 (1) Ensembl	Ensembl	2,987 nt	Select Tool ZFIN BLAST
ncRNA	hnrnpk-002 (1) Ensembl	Ensembl	775 nt	Select Tool
ncRNA	hnrnpk-003 (1) Ensembl	Ensembl	891 nt	Select Tool
ncRNA	hnrnpk-005 (1) Ensembl	Ensembl	719 nt	Select Tool
ncRNA	hnrnpk-007 (1) Ensembl	Ensembl	423 nt	Select Tool
ncRNA	hnrnpk-008 (1) Ensembl	Ensembl	849 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations