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ZIRC
ZFIN ID: ZDB-GENE-040426-1365
Gene Name: SLX4 interacting protein
Gene Symbol: slx4ip    Nomenclature History

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Previous Name: zgc:64090

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Is expressed in eye; optic tectum; proliferative region; retina; and ventricular zone. Orthologous to human SLX4IP (SLX4 interacting protein).
Genome Resources: Alliance (1),  Gene:393383 (1),  Ensembl(GRCz11):ENSDARG00000039069 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa698 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19065 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42248 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slx4ip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slx4ip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component cellular_component (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR031479 (1)
  • Pfam:PF15744 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slx4ip-203 (1)    Ensembl 2386
    ncRNA slx4ip-002 (1) 740
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slx4ip No data available
    MARKER RELATIONSHIPS
    slx4ip Contained in: [BAC] CH211-159E5 (1) (order this)
    slx4ip Encodes: [cDNA] MGC:64090 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200411 (1) 2782 bp
    Genomic GenBank:CU138575 (1) 156198 bp
    Select Tool
    Polypeptide UniProtKB:F1QME8 (1) 499 aa
    Sequence Clusters UniGene:26603 (1)
    Sequence Information (all 17)
    ORTHOLOGY for slx4ip ( Chr: 13 )
    CITATIONS (14)