Gene

cdh17

ID
ZDB-GENE-030910-3
Name
cadherin 17, LI cadherin (liver-intestine)
Symbol
cdh17 Nomenclature History
Previous Names
  • cb903 (1)
  • fb65d02
  • wu:fb65d02 (1)
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have cadherin binding activity; calcium ion binding activity; and cytoskeletal protein binding activity. Involved in pronephros development. Predicted to localize to adherens junction; catenin complex; and cell surface. Is expressed in intermediate cell mass of mesoderm; intermediate mesoderm; and renal system. Orthologous to human CDH17 (cadherin 17).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
82 figures from 47 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Horsfield et al., 2002
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cdh17 Human Ortholog
No data available
Associated With cdh17 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Family IPR039808 Cadherin
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin Cadherin conserved site Cadherin-like Cadherin-like superfamily
UniProtKB:Q90X63 868
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cdh17-201 (1) Ensembl 3,326 nt
mRNA cdh17-203 (1) Ensembl 3,168 nt
ncRNA cdh17-002 (1) Ensembl 634 nt
Interactions and Pathways
No data available
Antibodies
Name Type Antigen Genes Isotype Host Organism Assay Source Citations
Ab1-cdh17 polyclonal Rabbit
  • IHC
4
Ab2-cdh17 Rabbit
  • IHC
3
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations