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ZIRC
ZFIN ID: ZDB-GENE-030404-2
Gene Name: mindbomb E3 ubiquitin protein ligase 1
Gene Symbol: mib1
Sequence Ontology ID : SO:0000704

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Previous Names: mib, cg5841 (1), chunp6889, fe47f05, im:7148100 (1), KIAA1323 (1), mind bomb, white tail (3), wit (3), wu:fe47f05 (1)

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Exhibits protein homodimerization activity and ubiquitin-protein transferase activity. Involved in several processes, including animal organ development; nervous system development; and tube  ...
GENE EXPRESSION
All Expression Data: 11 figures from 9 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7148100]
  1 figure (1 image) from Thisse et al., 2005 [eu763]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi904Tg Transgenic Insertion Exon 4 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • m132 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • m178 Point Mutation Unknown Premature Stop ENU
    mib1_unspecified Unspecified Unknown Unknown
    nn2000 Point Mutation Unknown Premature Stop ENU
    nn2001 Insertion Unknown Unknown ENU
    sa31118 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa44378 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • ta52b Point Mutation Unknown Missense ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tfi91 Point Mutation Unknown Premature Stop
    tfi101 Point Mutation Unknown Missense
    Targeting reagents:
    PHENOTYPE
    Data: 121 figures from 70 publications
    Observed in:
    DISEASE ASSOCIATED WITH mib1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Left ventricular noncompaction 7 615092
    DISEASE ASSOCIATED WITH mib1 VIA EXPERIMENTAL MODELS
    Human Disease Fish Conditions Citations
    epilepsy mib1hi904Tg/hi904Tg standard conditions Hortopan et al., 2010
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process protein autoubiquitination (more)
    Cellular Component cytoplasm (more)
    Molecular Function ubiquitin-protein transferase activity (more)
    GO Terms (all 85)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA mib1-005 (1) 1647
    mRNA mib1-201 (1) 4673
    mib1-202 (1) 3227
    mib1-205 (1) 698
    mib1-206 (1) 712
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mib1
    MARKER RELATIONSHIPS
    mib1Contained in: [BAC] DKEY-2P18 (1) (order this)
    [Fosmid] CH1073-221A23 (1) (order this)
    mib1Encodes: [EST] eu763 (1), fe47f05, IMAGE:7148100 (1) (order this)
    [cDNA] MGC:193576 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_173286 (1) 3293bp
    Genomic GenBank:BX842700 (1) 198258bp
    Select Tool
    Polypeptide UniProtKB:B3DGQ0 (1) 1041aa
    Sequence Clusters UniGene:106501 (1)
    Sequence Information (all 42)
    ORTHOLOGY for mib1 (Chr: 2)
    CITATIONS (252)